Gene
RNA
| Item | Value |
|---|---|
| gene id | G967981 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 32428896 ~ 32429275 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1102859 | True | 380 | lncRNA | 0.34 | 1 | 32428896 | 32429275 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535577 | LOC106578587 | coding | upstream | 38091 | 32371461 ~ 32390805 (+) |
| LOC110535575 | LOC105028291 | coding | upstream | 74184 | 32350682 ~ 32354712 (+) |
| LOC110535570 | LOC106578590 | coding | upstream | 639546 | 31753869 ~ 31790306 (+) |
| LOC110535568 | LOC106578592 | coding | upstream | 1258913 | 31088864 ~ 31169983 (+) |
| LOC118937385 | NA | coding | upstream | 3922880 | 28499110 ~ 28506016 (+) |
| LOC110535578 | LOC106578586 | coding | downstream | 33150 | 32462425 ~ 32476477 (+) |
| ppp1r3g | LOC106578584 | coding | downstream | 53869 | 32483144 ~ 32485710 (+) |
| fars2 | fars2 | coding | downstream | 120214 | 32549489 ~ 32665562 (+) |
| LOC110535587 | LOC106578620 | coding | downstream | 408825 | 32838100 ~ 32859519 (+) |
| LOC110536598 | LOC106578619 | coding | downstream | 456512 | 32869194 ~ 32928578 (+) |
| G967980 | NA | non-coding | upstream | 1137 | 32427445 ~ 32427759 (+) |
| G967976 | NA | non-coding | upstream | 9931 | 32418749 ~ 32418965 (+) |
| G967975 | NA | non-coding | upstream | 10816 | 32417655 ~ 32418080 (+) |
| G967947 | NA | non-coding | upstream | 32519 | 32395356 ~ 32396377 (+) |
| G967948 | NA | non-coding | upstream | 35148 | 32392886 ~ 32393748 (+) |
| G967982 | NA | non-coding | downstream | 18 | 32429293 ~ 32429502 (+) |
| G967959 | NA | non-coding | downstream | 48347 | 32477622 ~ 32480568 (+) |
| G968129 | NA | non-coding | downstream | 237534 | 32666809 ~ 32667565 (+) |
| G968130 | NA | non-coding | downstream | 238391 | 32667666 ~ 32667918 (+) |
| G968152 | NA | non-coding | downstream | 281661 | 32710936 ~ 32711888 (+) |
| G965838 | NA | other | upstream | 1607644 | 30818838 ~ 30821252 (+) |
| LOC110535556 | LOC106578558 | other | upstream | 4178984 | 28132122 ~ 28249912 (+) |
| G962100 | NA | other | upstream | 4199495 | 28227528 ~ 28229401 (+) |
| G961984 | NA | other | upstream | 4487321 | 27897166 ~ 27941575 (+) |
| G961864 | NA | other | upstream | 4599719 | 27828746 ~ 27829177 (+) |
| LOC110536614 | LOC106578612 | other | downstream | 954768 | 33383589 ~ 33386375 (+) |
| LOC110535592 | lmbr1 | other | downstream | 1029086 | 33411705 ~ 33473890 (+) |
| G969455 | LOC106578609 | other | downstream | 1173772 | 33603047 ~ 33603674 (+) |
| G969456 | LOC106578609 | other | downstream | 1175238 | 33604513 ~ 33604810 (+) |
| G969752 | LOC106578632 | other | downstream | 1365100 | 33794375 ~ 33795061 (+) |
