G968748


Basic Information

Item Value
gene id G968748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32477612 ~ 32480544 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1103680
ACAAAAATGGAAGATGTCAAATTACTTTTGAGCAGCTGTAGAACATTCAGTGGCGAGTTCCCCTGCCTTCTAACACCCTAGCAGTTTAAAAACAGGGACAACCATGATATTTTACCATTAAAAAAACACATTGTCCTGGTCATATGGGGTCAACTTAATCCCGATTAAAATGGCTCCCAAAGTGTGAGTCTCGACACAGCAGTCACTTAAAATCAGTGCAAGAATGTGGCCTTCTCTATGGAACATTGAGACCCATGTCACCAGAAATGTGGGACCAGTGGGTTAACAGTTTTTCATACTGGGTTTTGGGACCATTCGGTTCACAGTTTTGCATATGTTAAAATGCAAAGGTAAGATGTGAAGCACATAATATATTATAGGCTGCTTTTATAAGCCTAAACTTCCATGTTCTGTTTCAATCGCAGGGTTACAGTATGTTAGAGTAATAGTGATATGacaacataaaaatatataaaaggtaactgccaaaatcaTGGAAACTCAAGTAAATACAAAGgcatacaaagtatattgaaagcaggtgcttccacacaggtgtggttccaggGTGAATTAAGCAATACAAATTCCATGTATAAAAATGCTTTGCCCGGCCAgtggatgacaatgcccccatccacagggcacgagtggtcactcaATGGCTCGAtgtgcatgaaaacgatgtaaaccatatgccatggccatctcagtcaccagagGGGTATCCTACGAAGCACATTTTAGGAGTTAGAGATAACTTTAGTCAACTCGGGCTAACTGGACATACAAAAGTGGTTccccttttagccaggtaaatttatatggcaacgaatccttcagaactaacctgctccggCGCAGGCTAACTCACTGCTAACTCCACTTACCctgaatgaaatgactgagctgtgagttgaggaccaatgaaatcagatACCCTCCCTCTTGCAAAGATTGCATTATAACTTGCCCACggattgatgtttcagcattgtctcaatgaagagtttggcGTTGGACTAGCCATGTACGACATGCATACACAGTTACAAGCCTGCGAGAGTTAGAGGCAAGCAGAGGAGCAATATCCACCGTCATAGTACagatgaagcctgagctggaatgtgaagctaactgaagccgGTAAGCTTTAGAAAAcactgagtagatctagcttgctttTCATAGAATATGGCTAAGatttcaacccaattgaacacttatgggagattccgGAGCGGCGCTCGAGACAGCGTTTCCACCACAAATATCAAAgtaccaaattatggaatttcttgtgggagaatggtgtcgcatccctcagAGCTCCAGCTGTTCTATCTCATGGTAGCCCAATGCCATATTAAAACACCTTattttttttcctttattttggcagttaccagtCTATTTCAATTTTACATTCTCAATACATGAATCTACATTTGTCTAAAATCTCcatatgtaaataagtattttatttatatatacacagtcaTGTGAAAAAGCAAGTATAACCCCTGGAAAGTGGTCtttaaaaaatacatacataaccagtcaaaagttttggacagacctactcatgccagggtttttatttatttttactattttctacattgtagaataatagtgaagacatcaaaactatgaaattacacatatggaattatgtagtaaccccaaaaaagtgttaaacaaatccaaatatattttatatttgagattcttcaaagtagccaccctttgccttgacagctttgcacactcttggcattctctcaaccagcttcatgaggtagtcacctagaatgcatttaaattaacaggtgtgccttgttaaaagtacttaaaaaaaaatgtatttccttaATGAATTTGAGCCAAACGGTGTTGTGACATGGGTAGTATACAGAAGTTAggcttatttggtaaaagaccaagtcgatattatggcaaaaacagctcaaataagataaatgacagtccaccatcactttaagacatgaaggtcagtcaatctggaaaatgtcaagaaaatgtcaagaacttttcaagtttcttcaagtgcagtcgcaaaaaccatcaagcgctatgatgaaactggctcatgaggaccaccacaggaatggaagacccagattaacctctgctgcagaggataagttcattagagttacagcctcagaaattgcagcccaaataaatgcttcagagttcaagtaacagacacatcacaacatcaactgttcagaggagactgcgtgaatcaggccttcaggtcaaatttctgcaaagaaaccactactaaaggacaccaataagaagagacttgtttgggccaagaaacacgagtaatggccaatagatcggtggaaatctgtccatcggtctgatgagtccaaatttgacatgtttggttccaaccaccatgtctttgtgagacacacaGTAGGTGAACCGATGATCtccgcatttgtggttcccaccgtgaagcatagagaAGGTGTGAAGGTGCTTCGCTGgttacactgtcagtgatttatttagaattcaaggtacacttaaccagcatggctaccatagcattctgcaagtcatacgccatcccatctggtttgcgcttagtgggactatcatttgtttttcaacaggacaataacccaacacaactccaggctgtgtaagggttatatgacaaagaaggagagtgatggagtgctgcatcagatgacctggcctccacaatcccccgacctcaacccaatggaggtggtttgggatgagttggaccgcaaagtgaaggaaaagcagccaacaagtgctcagcatgtgggaactccttcaagactgttagaaaagcattccaggtgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1103680 True 2933 lncRNA 0.41 1 32477612 32480544

Neighbor

gene id symbol gene type direction distance location
LOC110536613 NA coding downstream 42161 32434028 ~ 32435451 (-)
LOC110535574 peci coding downstream 162737 32298402 ~ 32314875 (-)
LOC110535572 LOC106578588 coding downstream 219205 32245466 ~ 32258407 (-)
LOC110535571 LOC106578589 coding downstream 569348 31853797 ~ 31908264 (-)
LOC110535569 LOC106578596 coding downstream 1068227 31407966 ~ 31409385 (-)
LOC110535581 LOC106578582 coding upstream 8651 32489195 ~ 32549643 (-)
LOC110535582 LOC106578581 coding upstream 214818 32695362 ~ 32702585 (-)
LOC110536595 LOC106578630 coding upstream 241729 32722273 ~ 32749027 (-)
LOC110536597 LOC106578630 coding upstream 287221 32767765 ~ 32796075 (-)
LOC110535590 LOC106578614 coding upstream 773830 33254374 ~ 33320337 (-)
G968722 NA non-coding downstream 46541 32430832 ~ 32431071 (-)
G968720 NA non-coding downstream 48612 32428600 ~ 32429000 (-)
G968717 NA non-coding downstream 50035 32427191 ~ 32427577 (-)
G968711 NA non-coding downstream 60703 32416684 ~ 32416909 (-)
G968709 NA non-coding downstream 71913 32405380 ~ 32405699 (-)
G968749 NA non-coding upstream 2757 32483301 ~ 32486674 (-)
G968751 NA non-coding upstream 6454 32486998 ~ 32488332 (-)
G968844 NA non-coding upstream 155949 32636493 ~ 32666377 (-)
G968875 NA non-coding upstream 202742 32683286 ~ 32683521 (-)
G968894 NA non-coding upstream 233179 32713723 ~ 32714040 (-)
G967535 NA other downstream 424419 32050960 ~ 32053193 (-)
G966663 LOC100194703 other downstream 1086268 31391036 ~ 31391344 (-)
G962982 NA other downstream 3755309 28721646 ~ 28722303 (-)
G961930 LOC106578555 other downstream 4640844 27835966 ~ 27836768 (-)
G961041 LOC107713907 other downstream 5674786 26737174 ~ 26802826 (-)
G968868 NA other upstream 186208 32666752 ~ 32667490 (-)
G970066 NA other upstream 1394270 33874814 ~ 33875272 (-)
LOC110535616 LOC106578707 other upstream 2329749 34810223 ~ 34978953 (-)
G971137 NA other upstream 2356428 34836972 ~ 34838926 (-)

Expression


Co-expression Network