G968129


Basic Information

Item Value
gene id G968129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32666809 ~ 32667565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1103009
cgccaaacataacgttttgcattgttgccaaaaagttccattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaaaactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtttgatctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacttgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtattatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtttgaaatatccaataaatgtcgttccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1103009 True 757 lncRNA 0.42 1 32666809 32667565

Neighbor

gene id symbol gene type direction distance location
fars2 fars2 coding upstream 1247 32549489 ~ 32665562 (+)
ppp1r3g LOC106578584 coding upstream 181099 32483144 ~ 32485710 (+)
LOC110535578 LOC106578586 coding upstream 190332 32462425 ~ 32476477 (+)
LOC110535577 LOC106578587 coding upstream 276004 32371461 ~ 32390805 (+)
LOC110535575 LOC105028291 coding upstream 312097 32350682 ~ 32354712 (+)
LOC110535587 LOC106578620 coding downstream 170535 32838100 ~ 32859519 (+)
LOC110536598 LOC106578619 coding downstream 218222 32869194 ~ 32928578 (+)
LOC110535588 LOC106578617 coding downstream 261655 32929220 ~ 32945244 (+)
LOC110535589 LOC106578615 coding downstream 278203 32945768 ~ 33234543 (+)
LOC110536614 LOC106578612 coding downstream 716024 33383589 ~ 33386375 (+)
G967959 NA non-coding upstream 186241 32477622 ~ 32480568 (+)
G967982 NA non-coding upstream 237307 32429293 ~ 32429502 (+)
G967981 NA non-coding upstream 237534 32428896 ~ 32429275 (+)
G967980 NA non-coding upstream 239050 32427445 ~ 32427759 (+)
G967976 NA non-coding upstream 247844 32418749 ~ 32418965 (+)
G968130 NA non-coding downstream 101 32667666 ~ 32667918 (+)
G968152 NA non-coding downstream 43371 32710936 ~ 32711888 (+)
G968155 NA non-coding downstream 48076 32715641 ~ 32715992 (+)
G968158 NA non-coding downstream 52260 32719825 ~ 32720350 (+)
G965838 NA other upstream 1845557 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 4416897 28132122 ~ 28249912 (+)
G962100 NA other upstream 4437408 28227528 ~ 28229401 (+)
G961984 NA other upstream 4725234 27897166 ~ 27941575 (+)
G961864 NA other upstream 4837632 27828746 ~ 27829177 (+)
LOC110535592 lmbr1 other downstream 790796 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 935482 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 936948 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 1126810 33794375 ~ 33795061 (+)

Expression


Co-expression Network