G968152



Basic Information


Item Value
gene id G968152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32710936 ~ 32711888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1103033
gcttctactttaccatttgattcaggggagaaagcatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagttcgcgttttgaggactgaattttcggattttttttggtagccaaatgtgatgtataaaagggagctatttctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgctaacgctagctagctacttttacacaaattattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagagatggcatatttatttcatttcatttgcgattttcataaatagttaacgttgtgttatgctaatgagcttgctgatagatttacacaatcctggatacaggggttttttcatagctaaacgtgacgcagaaaacggagcgatttgtcctaaacaaataatctttcaggaaaaactgaacatttgctatctgagagtatcctcattgaaaacatctgaagttcttcaaaggtaaatgattttatttgaatgcttttctgttttttttgtgtaaatgttgccagctgaatgctaatgctaaatgctacgttagccatcaatactgttacacaaatgcttgttttgcaatggttgagaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgagagctagcatatttatttcatttcatttgcgattttcatgaatag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1103033 True 953 lncRNA 0.34 1 32710936 32711888

Neighbor


gene id symbol gene type direction distance location
fars2 fars2 coding upstream 45374 32549489 ~ 32665562 (+)
ppp1r3g LOC106578584 coding upstream 225226 32483144 ~ 32485710 (+)
LOC110535578 LOC106578586 coding upstream 234459 32462425 ~ 32476477 (+)
LOC110535577 LOC106578587 coding upstream 320131 32371461 ~ 32390805 (+)
LOC110535575 LOC105028291 coding upstream 356224 32350682 ~ 32354712 (+)
LOC110535587 LOC106578620 coding downstream 126212 32838100 ~ 32859519 (+)
LOC110536598 LOC106578619 coding downstream 173899 32869194 ~ 32928578 (+)
LOC110535588 LOC106578617 coding downstream 217332 32929220 ~ 32945244 (+)
LOC110535589 LOC106578615 coding downstream 233880 32945768 ~ 33234543 (+)
LOC110536614 LOC106578612 coding downstream 671701 33383589 ~ 33386375 (+)
G968130 NA non-coding upstream 43018 32667666 ~ 32667918 (+)
G968129 NA non-coding upstream 43371 32666809 ~ 32667565 (+)
G967959 NA non-coding upstream 230368 32477622 ~ 32480568 (+)
G967982 NA non-coding upstream 281434 32429293 ~ 32429502 (+)
G967981 NA non-coding upstream 281661 32428896 ~ 32429275 (+)
G968155 NA non-coding downstream 3753 32715641 ~ 32715992 (+)
G968158 NA non-coding downstream 7937 32719825 ~ 32720350 (+)
G968494 NA non-coding downstream 559516 33271404 ~ 33272172 (+)
G968545 NA non-coding downstream 614799 33326687 ~ 33326975 (+)
G965838 NA other upstream 1889684 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 4461024 28132122 ~ 28249912 (+)
G962100 NA other upstream 4481535 28227528 ~ 28229401 (+)
G961984 NA other upstream 4769361 27897166 ~ 27941575 (+)
G961864 NA other upstream 4881759 27828746 ~ 27829177 (+)
LOC110535592 lmbr1 other downstream 746473 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 891159 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 892625 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 1082487 33794375 ~ 33795061 (+)

Expression



Co-expression Network