G968158


Basic Information

Item Value
gene id G968158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 32719825 ~ 32720350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1103039
atttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatccccacccggcacagccagaagaggactaataagaataaaataccctttgtttattttacacacacttttttttattttactatgtcaatatgtctttgttGTAAATATTTGGgggtcaaactggtggcagttgtgaaaaaataCAATagttaggtttctATGCTGCCTCCTACCCCAGAGAAGTTAATTGAGGTTCAGTTTaggaacattgagaacataattctcataacactttccaagtcatgtccaataaaatgaatttaccacaggtggactccgttcaagttgtagaagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1103039 True 356 lncRNA 0.36 2 32719825 32720350

Neighbor

gene id symbol gene type direction distance location
fars2 fars2 coding upstream 54263 32549489 ~ 32665562 (+)
ppp1r3g LOC106578584 coding upstream 234115 32483144 ~ 32485710 (+)
LOC110535578 LOC106578586 coding upstream 243348 32462425 ~ 32476477 (+)
LOC110535577 LOC106578587 coding upstream 329020 32371461 ~ 32390805 (+)
LOC110535575 LOC105028291 coding upstream 365113 32350682 ~ 32354712 (+)
LOC110535587 LOC106578620 coding downstream 117750 32838100 ~ 32859519 (+)
LOC110536598 LOC106578619 coding downstream 165437 32869194 ~ 32928578 (+)
LOC110535588 LOC106578617 coding downstream 208870 32929220 ~ 32945244 (+)
LOC110535589 LOC106578615 coding downstream 225418 32945768 ~ 33234543 (+)
LOC110536614 LOC106578612 coding downstream 663239 33383589 ~ 33386375 (+)
G968155 NA non-coding upstream 3833 32715641 ~ 32715992 (+)
G968152 NA non-coding upstream 7937 32710936 ~ 32711888 (+)
G968130 NA non-coding upstream 51907 32667666 ~ 32667918 (+)
G968129 NA non-coding upstream 52260 32666809 ~ 32667565 (+)
G967959 NA non-coding upstream 239257 32477622 ~ 32480568 (+)
G968494 NA non-coding downstream 551054 33271404 ~ 33272172 (+)
G968545 NA non-coding downstream 606337 33326687 ~ 33326975 (+)
G968549 NA non-coding downstream 612390 33332740 ~ 33332999 (+)
G968520 NA non-coding downstream 624096 33344446 ~ 33425507 (+)
G965838 NA other upstream 1898573 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 4469913 28132122 ~ 28249912 (+)
G962100 NA other upstream 4490424 28227528 ~ 28229401 (+)
G961984 NA other upstream 4778250 27897166 ~ 27941575 (+)
G961864 NA other upstream 4890648 27828746 ~ 27829177 (+)
LOC110535592 lmbr1 other downstream 738011 33411705 ~ 33473890 (+)
G969455 LOC106578609 other downstream 882697 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 884163 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 1074025 33794375 ~ 33795061 (+)

Expression


Co-expression Network