G969348


Basic Information

Item Value
gene id G969348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33487283 ~ 33487561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104310
gactgcatccagtttgttgagtagagtgttggaggctattttatagatgacatcaccgaagtcgaggatcggtaggatggtcagttttccgtgggtatgtttggcagcatgagtgaaggatgctttgttgcgatataggaagccaattctagattgaattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctaatcagacacccgggtatttgtagttgtccacgtattctaagtcagagccgtccagagtagtgatgctgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104310 True 279 lncRNA 0.44 1 33487283 33487561

Neighbor

gene id symbol gene type direction distance location
LOC110535592 lmbr1 coding upstream 13393 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 100908 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 252740 32945768 ~ 33234543 (+)
LOC110535588 LOC106578617 coding upstream 542039 32929220 ~ 32945244 (+)
LOC110536598 LOC106578619 coding upstream 558705 32869194 ~ 32928578 (+)
shh LOC106578610 coding downstream 86141 33573702 ~ 33582073 (+)
LOC110535596 NA coding downstream 157272 33644833 ~ 33690571 (+)
LOC110535601 LOC106590111 coding downstream 421155 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 687941 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 696278 34183839 ~ 34427557 (+)
G969347 NA non-coding upstream 2422 33484437 ~ 33484861 (+)
G969346 NA non-coding upstream 4177 33482896 ~ 33483106 (+)
G968649 NA non-coding upstream 12149 33474901 ~ 33475134 (+)
G968520 NA non-coding upstream 61776 33344446 ~ 33425507 (+)
G968549 NA non-coding upstream 154284 33332740 ~ 33332999 (+)
G969415 NA non-coding downstream 50022 33537583 ~ 33537809 (+)
G969416 NA non-coding downstream 50636 33538197 ~ 33538411 (+)
G969444 NA non-coding downstream 95606 33583167 ~ 33583439 (+)
G969445 NA non-coding downstream 95904 33583465 ~ 33583674 (+)
G969440 NA non-coding downstream 103639 33591200 ~ 33594127 (+)
G965838 NA other upstream 2666031 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 5237371 28132122 ~ 28249912 (+)
G969455 LOC106578609 other downstream 115486 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 116952 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 306814 33794375 ~ 33795061 (+)
G970054 LOC106578636 other downstream 676255 34163816 ~ 34170987 (+)
G970283 NA other downstream 692142 34179703 ~ 34180048 (+)

Expression


Co-expression Network