G969444


Basic Information

Item Value
gene id G969444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33583167 ~ 33583439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104407
TGAGCAGAAAAGATGGAAGGAATATAACTTTAGGTAAATTGGTAAGATGTCCCAGGAGACTAAACTGTAGGTGAGATTGCTGATGCTAAATTGCTGGTCATGTTCTACACAAGGCTCTAGCTGAGAAAGTGGTGCAATGGTAATTTGGCATGCATCACATATGACATATATTTGACAcaaacagagccttcagaaagtatttacaccccttgactttttataaacattttaattccaatgtgtaacaacaaaatgtatgTAATTTTCTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104407 True 273 lncRNA 0.36 1 33583167 33583439

Neighbor

gene id symbol gene type direction distance location
shh LOC106578610 coding upstream 1094 33573702 ~ 33582073 (+)
LOC110535592 lmbr1 coding upstream 109277 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 196792 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 348624 32945768 ~ 33234543 (+)
LOC110535588 LOC106578617 coding upstream 637923 32929220 ~ 32945244 (+)
LOC110535596 NA coding downstream 61394 33644833 ~ 33690571 (+)
LOC110535601 LOC106590111 coding downstream 325277 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 592063 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 600400 34183839 ~ 34427557 (+)
LOC110535606 LOC106578642 coding downstream 844619 34428058 ~ 34430799 (+)
G969416 NA non-coding upstream 44756 33538197 ~ 33538411 (+)
G969415 NA non-coding upstream 45358 33537583 ~ 33537809 (+)
G969348 NA non-coding upstream 95606 33487283 ~ 33487561 (+)
G969347 NA non-coding upstream 98306 33484437 ~ 33484861 (+)
G969346 NA non-coding upstream 100061 33482896 ~ 33483106 (+)
G969445 NA non-coding downstream 26 33583465 ~ 33583674 (+)
G969440 NA non-coding downstream 7761 33591200 ~ 33594127 (+)
G969441 NA non-coding downstream 11108 33594547 ~ 33594805 (+)
G969449 NA non-coding downstream 13257 33596696 ~ 33596911 (+)
G969452 NA non-coding downstream 15664 33599103 ~ 33599303 (+)
G965838 NA other upstream 2761915 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 5333255 28132122 ~ 28249912 (+)
G969455 LOC106578609 other downstream 19608 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 21074 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 210936 33794375 ~ 33795061 (+)
G970054 LOC106578636 other downstream 580377 34163816 ~ 34170987 (+)
G970283 NA other downstream 596264 34179703 ~ 34180048 (+)

Expression


Co-expression Network