G969454


Basic Information

Item Value
gene id G969454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33600661 ~ 33600898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104417
ggcaaatgttgcacaatccaagtgtggaaagctcttagagactcacctatagagactcacagctgttatcgctgccaaaggtgcttgggggtgtgaatacttcagTAAATTATATAAATCTGTATTTCAATATCAATAAATGTTCTAAAATgtcatgtttttactttgtcattatggggtattgtgtgtagatgggtgaacaACAATTATatatcatccattttgaattcaggctgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104417 True 238 lncRNA 0.36 1 33600661 33600898

Neighbor

gene id symbol gene type direction distance location
shh LOC106578610 coding upstream 18588 33573702 ~ 33582073 (+)
LOC110535592 lmbr1 coding upstream 126771 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 214286 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 366118 32945768 ~ 33234543 (+)
LOC110535588 LOC106578617 coding upstream 655417 32929220 ~ 32945244 (+)
LOC110535596 NA coding downstream 43935 33644833 ~ 33690571 (+)
LOC110535601 LOC106590111 coding downstream 307818 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 574604 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 582941 34183839 ~ 34427557 (+)
LOC110535606 LOC106578642 coding downstream 827160 34428058 ~ 34430799 (+)
G969452 NA non-coding upstream 1358 33599103 ~ 33599303 (+)
G969449 NA non-coding upstream 3750 33596696 ~ 33596911 (+)
G969441 NA non-coding upstream 5856 33594547 ~ 33594805 (+)
G969440 NA non-coding upstream 6534 33591200 ~ 33594127 (+)
G969445 NA non-coding upstream 16987 33583465 ~ 33583674 (+)
G969457 NA non-coding downstream 4163 33605061 ~ 33619499 (+)
G969475 NA non-coding downstream 27267 33628165 ~ 33725829 (+)
G969746 NA non-coding downstream 184446 33785344 ~ 33785953 (+)
G969748 NA non-coding downstream 186728 33787626 ~ 33787848 (+)
G965838 NA other upstream 2779409 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 5350749 28132122 ~ 28249912 (+)
G969455 LOC106578609 other downstream 2149 33603047 ~ 33603674 (+)
G969456 LOC106578609 other downstream 3615 33604513 ~ 33604810 (+)
G969752 LOC106578632 other downstream 193477 33794375 ~ 33795061 (+)
G970054 LOC106578636 other downstream 562918 34163816 ~ 34170987 (+)
G970283 NA other downstream 578805 34179703 ~ 34180048 (+)

Expression


Co-expression Network