G969456 (LOC106578609)


Basic Information

Item Value
gene id G969456
gene name LOC106578609
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33604513 ~ 33604810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104419
TACTGCTATGTTTGGCTGAATGCCTGTGGAATCCCTGCGAACCACCGTTCTTTCAGGTGGTCCAGGTAGCTGTGCTGCAGCCTTGTTGGCAGCAGTAGGCTGGGCTCTCCCTCTGCTACCGCCGGGGACCGGCCAAGCGTTCAGGCTCGGTCGCACCCCCGCCTGCATTGCCCTGGCAACGGGCCTGACGTTGGGCGCCGAGGCGGGGCGGACATTGTTCATGTTTTGGTTGCCAGGTGCCACGGGGAGCTCGCGGAGGTTGCTGTTGCGCTGGGGAAGGACTTTCAGTGCAGGAGGG

Function

NR:

description
RNA-binding protein 33-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104419 True 298 TUCP 0.63 1 33604513 33604810

Neighbor

gene id symbol gene type direction distance location
shh LOC106578610 coding upstream 22440 33573702 ~ 33582073 (+)
LOC110535592 lmbr1 coding upstream 130623 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 218138 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 369970 32945768 ~ 33234543 (+)
LOC110535588 LOC106578617 coding upstream 659269 32929220 ~ 32945244 (+)
LOC110535596 NA coding downstream 40023 33644833 ~ 33690571 (+)
LOC110535601 LOC106590111 coding downstream 303906 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 570692 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 579029 34183839 ~ 34427557 (+)
LOC110535606 LOC106578642 coding downstream 823248 34428058 ~ 34430799 (+)
G969454 NA non-coding upstream 3615 33600661 ~ 33600898 (+)
G969452 NA non-coding upstream 5210 33599103 ~ 33599303 (+)
G969449 NA non-coding upstream 7602 33596696 ~ 33596911 (+)
G969441 NA non-coding upstream 9708 33594547 ~ 33594805 (+)
G969440 NA non-coding upstream 10386 33591200 ~ 33594127 (+)
G969457 NA non-coding downstream 251 33605061 ~ 33619499 (+)
G969475 NA non-coding downstream 23355 33628165 ~ 33725829 (+)
G969746 NA non-coding downstream 180534 33785344 ~ 33785953 (+)
G969748 NA non-coding downstream 182816 33787626 ~ 33787848 (+)
G969455 LOC106578609 other upstream 839 33603047 ~ 33603674 (+)
G965838 NA other upstream 2783261 30818838 ~ 30821252 (+)
LOC110535556 LOC106578558 other upstream 5354601 28132122 ~ 28249912 (+)
G969752 LOC106578632 other downstream 189565 33794375 ~ 33795061 (+)
G970054 LOC106578636 other downstream 559006 34163816 ~ 34170987 (+)
G970283 NA other downstream 574893 34179703 ~ 34180048 (+)
G970489 LOC106578645 other downstream 913016 34516457 ~ 34522340 (+)
G972725 NA other downstream 2645163 36249973 ~ 36250586 (+)

Expression


Co-expression Network