Gene
RNA
| Item | Value |
|---|---|
| gene id | G969457 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 33605061 ~ 33619499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-binding protein 33-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1104421 | True | 291 | lncRNA | 0.66 | 2 | 33605061 | 33619499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shh | LOC106578610 | coding | upstream | 22988 | 33573702 ~ 33582073 (+) |
| LOC110535592 | lmbr1 | coding | upstream | 131171 | 33411705 ~ 33473890 (+) |
| LOC110536614 | LOC106578612 | coding | upstream | 218686 | 33383589 ~ 33386375 (+) |
| LOC110535589 | LOC106578615 | coding | upstream | 370518 | 32945768 ~ 33234543 (+) |
| LOC110535588 | LOC106578617 | coding | upstream | 659817 | 32929220 ~ 32945244 (+) |
| LOC110535596 | NA | coding | downstream | 25334 | 33644833 ~ 33690571 (+) |
| LOC110535601 | LOC106590111 | coding | downstream | 289217 | 33908713 ~ 34154878 (+) |
| LOC110535603 | LOC106578637 | coding | downstream | 556003 | 34175502 ~ 34177730 (+) |
| LOC110535604 | LOC106578639 | coding | downstream | 564340 | 34183839 ~ 34427557 (+) |
| LOC110535606 | LOC106578642 | coding | downstream | 808559 | 34428058 ~ 34430799 (+) |
| G969454 | NA | non-coding | upstream | 4163 | 33600661 ~ 33600898 (+) |
| G969452 | NA | non-coding | upstream | 5758 | 33599103 ~ 33599303 (+) |
| G969449 | NA | non-coding | upstream | 8150 | 33596696 ~ 33596911 (+) |
| G969441 | NA | non-coding | upstream | 10256 | 33594547 ~ 33594805 (+) |
| G969440 | NA | non-coding | upstream | 10934 | 33591200 ~ 33594127 (+) |
| G969475 | NA | non-coding | downstream | 8666 | 33628165 ~ 33725829 (+) |
| G969746 | NA | non-coding | downstream | 165845 | 33785344 ~ 33785953 (+) |
| G969748 | NA | non-coding | downstream | 168127 | 33787626 ~ 33787848 (+) |
| G969756 | NA | non-coding | downstream | 181010 | 33800509 ~ 33800766 (+) |
| G969456 | LOC106578609 | other | upstream | 251 | 33604513 ~ 33604810 (+) |
| G969455 | LOC106578609 | other | upstream | 1387 | 33603047 ~ 33603674 (+) |
| G965838 | NA | other | upstream | 2783809 | 30818838 ~ 30821252 (+) |
| G969752 | LOC106578632 | other | downstream | 174876 | 33794375 ~ 33795061 (+) |
| G970054 | LOC106578636 | other | downstream | 544317 | 34163816 ~ 34170987 (+) |
| G970283 | NA | other | downstream | 560204 | 34179703 ~ 34180048 (+) |
| G970489 | LOC106578645 | other | downstream | 898327 | 34516457 ~ 34522340 (+) |
| G972725 | NA | other | downstream | 2630474 | 36249973 ~ 36250586 (+) |
