G969475


Basic Information

Item Value
gene id G969475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33628165 ~ 33725829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104440
gtataaaacggagctatttctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttgaaatgttgcgtgctggatgctaatgctaatgctaacgctaaatgctacgctagctagctacttttacacaaattattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagagatggcatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatggtaatgagcttgagtctgtattcacgatcccggatccgggatggggagatcagaaaggttaaggagaagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104440 True 427 lncRNA 0.36 2 33628165 33725829

Neighbor

gene id symbol gene type direction distance location
shh LOC106578610 coding upstream 46092 33573702 ~ 33582073 (+)
LOC110535592 lmbr1 coding upstream 154275 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 241790 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 393622 32945768 ~ 33234543 (+)
LOC110535588 LOC106578617 coding upstream 682921 32929220 ~ 32945244 (+)
LOC110535601 LOC106590111 coding downstream 182887 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 449673 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 458010 34183839 ~ 34427557 (+)
LOC110535606 LOC106578642 coding downstream 702229 34428058 ~ 34430799 (+)
acad11 acad11 coding downstream 723893 34449722 ~ 34515337 (+)
G969457 NA non-coding upstream 8666 33605061 ~ 33619499 (+)
G969454 NA non-coding upstream 27267 33600661 ~ 33600898 (+)
G969452 NA non-coding upstream 28862 33599103 ~ 33599303 (+)
G969449 NA non-coding upstream 31254 33596696 ~ 33596911 (+)
G969441 NA non-coding upstream 33360 33594547 ~ 33594805 (+)
G969746 NA non-coding downstream 59515 33785344 ~ 33785953 (+)
G969748 NA non-coding downstream 61797 33787626 ~ 33787848 (+)
G969756 NA non-coding downstream 74680 33800509 ~ 33800766 (+)
G969757 NA non-coding downstream 74997 33800826 ~ 33801054 (+)
G969759 NA non-coding downstream 76784 33802613 ~ 33802829 (+)
G969456 LOC106578609 other upstream 23355 33604513 ~ 33604810 (+)
G969455 LOC106578609 other upstream 24491 33603047 ~ 33603674 (+)
G965838 NA other upstream 2806913 30818838 ~ 30821252 (+)
G969752 LOC106578632 other downstream 68546 33794375 ~ 33795061 (+)
G970054 LOC106578636 other downstream 437987 34163816 ~ 34170987 (+)
G970283 NA other downstream 453874 34179703 ~ 34180048 (+)
G970489 LOC106578645 other downstream 791997 34516457 ~ 34522340 (+)
G972725 NA other downstream 2524144 36249973 ~ 36250586 (+)

Expression


Co-expression Network