G969824


Basic Information

Item Value
gene id G969824
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 33845137 ~ 33845360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1104810
cgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgtactcaataccatctactgtatcttgcctatgcctctctgtaccatcactcattcatatacctttatgtacatattctttatccccttacacttgtgtctataaggcaGTAGTt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1104810 True 224 lncRNA 0.34 1 33845137 33845360

Neighbor

gene id symbol gene type direction distance location
LOC110535596 NA coding upstream 154566 33644833 ~ 33690571 (+)
shh LOC106578610 coding upstream 263064 33573702 ~ 33582073 (+)
LOC110535592 lmbr1 coding upstream 371247 33411705 ~ 33473890 (+)
LOC110536614 LOC106578612 coding upstream 458762 33383589 ~ 33386375 (+)
LOC110535589 LOC106578615 coding upstream 610594 32945768 ~ 33234543 (+)
LOC110535601 LOC106590111 coding downstream 63356 33908713 ~ 34154878 (+)
LOC110535603 LOC106578637 coding downstream 330142 34175502 ~ 34177730 (+)
LOC110535604 LOC106578639 coding downstream 338479 34183839 ~ 34427557 (+)
LOC110535606 LOC106578642 coding downstream 582698 34428058 ~ 34430799 (+)
acad11 acad11 coding downstream 604362 34449722 ~ 34515337 (+)
G969766 NA non-coding upstream 36098 33808790 ~ 33809039 (+)
G969759 NA non-coding upstream 42308 33802613 ~ 33802829 (+)
G969757 NA non-coding upstream 44083 33800826 ~ 33801054 (+)
G969756 NA non-coding upstream 44371 33800509 ~ 33800766 (+)
G969748 NA non-coding upstream 57289 33787626 ~ 33787848 (+)
G969826 NA non-coding downstream 3703 33849063 ~ 33854568 (+)
G969834 NA non-coding downstream 17228 33862588 ~ 33863482 (+)
G969838 NA non-coding downstream 29578 33874938 ~ 33875272 (+)
G970000 NA non-coding downstream 233957 34079317 ~ 34080202 (+)
G969752 LOC106578632 other upstream 50076 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 240327 33604513 ~ 33604810 (+)
G969455 LOC106578609 other upstream 241463 33603047 ~ 33603674 (+)
G970054 LOC106578636 other downstream 318456 34163816 ~ 34170987 (+)
G970283 NA other downstream 334343 34179703 ~ 34180048 (+)
G970489 LOC106578645 other downstream 672466 34516457 ~ 34522340 (+)
G972725 NA other downstream 2404613 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 3696736 37542062 ~ 37543202 (+)

Expression


Co-expression Network