Gene
RNA
| Item | Value |
|---|---|
| gene id | G969834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 33862588 ~ 33863482 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110535600 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1104821 | True | 563 | lncRNA | 0.44 | 2 | 33862588 | 33863482 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535596 | NA | coding | upstream | 172017 | 33644833 ~ 33690571 (+) |
| shh | LOC106578610 | coding | upstream | 280515 | 33573702 ~ 33582073 (+) |
| LOC110535592 | lmbr1 | coding | upstream | 388698 | 33411705 ~ 33473890 (+) |
| LOC110536614 | LOC106578612 | coding | upstream | 476213 | 33383589 ~ 33386375 (+) |
| LOC110535589 | LOC106578615 | coding | upstream | 628045 | 32945768 ~ 33234543 (+) |
| LOC110535601 | LOC106590111 | coding | downstream | 45234 | 33908713 ~ 34154878 (+) |
| LOC110535603 | LOC106578637 | coding | downstream | 312020 | 34175502 ~ 34177730 (+) |
| LOC110535604 | LOC106578639 | coding | downstream | 320357 | 34183839 ~ 34427557 (+) |
| LOC110535606 | LOC106578642 | coding | downstream | 564576 | 34428058 ~ 34430799 (+) |
| acad11 | acad11 | coding | downstream | 586240 | 34449722 ~ 34515337 (+) |
| G969826 | NA | non-coding | upstream | 8020 | 33849063 ~ 33854568 (+) |
| G969824 | NA | non-coding | upstream | 17228 | 33845137 ~ 33845360 (+) |
| G969766 | NA | non-coding | upstream | 53549 | 33808790 ~ 33809039 (+) |
| G969759 | NA | non-coding | upstream | 59759 | 33802613 ~ 33802829 (+) |
| G969757 | NA | non-coding | upstream | 61534 | 33800826 ~ 33801054 (+) |
| G969838 | NA | non-coding | downstream | 11456 | 33874938 ~ 33875272 (+) |
| G970000 | NA | non-coding | downstream | 215835 | 34079317 ~ 34080202 (+) |
| G970023 | NA | non-coding | downstream | 247759 | 34111241 ~ 34111498 (+) |
| G970039 | NA | non-coding | downstream | 272299 | 34135781 ~ 34136012 (+) |
| G969752 | LOC106578632 | other | upstream | 67527 | 33794375 ~ 33795061 (+) |
| G969456 | LOC106578609 | other | upstream | 257778 | 33604513 ~ 33604810 (+) |
| G969455 | LOC106578609 | other | upstream | 258914 | 33603047 ~ 33603674 (+) |
| G970054 | LOC106578636 | other | downstream | 300334 | 34163816 ~ 34170987 (+) |
| G970283 | NA | other | downstream | 316221 | 34179703 ~ 34180048 (+) |
| G970489 | LOC106578645 | other | downstream | 654344 | 34516457 ~ 34522340 (+) |
| G972725 | NA | other | downstream | 2386491 | 36249973 ~ 36250586 (+) |
| LOC110535658 | NA | other | downstream | 3678614 | 37542062 ~ 37543202 (+) |
