G970232


Basic Information

Item Value
gene id G970232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34153671 ~ 34156019 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1105250
ttgttatataccctttgttggcaatgacagaggtcaaacattttctgtaagtcttcacaaggttttcacacactgttgctggcccattcctccatgctcctctagagcagtgatgttttggggctgttgctgggcaacacggacttccaactccctctaaagattttctatagggttgagatctggagactggctaggccactccaggaccttgaaatgcatcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcatgcccttgctgatggtaggctttgttactttggtcccagctctctgcaggtcattcacttggtccccccgtgtggttctgggatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtagagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgcttccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgatggctctttggtcttggccatagtggagtttggagtgtgagtgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgcaattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttatttttgccccactgtataaactTATTTTAACCTTTTGAATATTGTCTAATTAATATAGAAATCATACCGAACAGTTAATTCATCACGATTTCCATCACAAACAAATGAGAATTTTCAGTCATAAACATGTTTCTCTTATACATtcaccagtttattaggtacaccaccccgttcacgaaaatggATCACTCCTACAGACAGGGAGAAATGTGGCCGTGGCTTGTTATATAATCCAGGCAGACAGCCATTGAGGCATTCCGTTACTGTtggattgaacgttagaatgggcaaaacgagtgacctcaGCAATTTTGAGTGTGGtgtgatcgtcggtgccaggcgccGACGATCACACATCTCAGAAATGGCTActctcctgggcttttcacgcatgaCAGTGTATATGGTTCACTGAGAATGGTGCAACACACCAAAAACATCCAGTcggcggcagtcctgtgggcgaacaGGTGGttgatgagagagatggagggagaatgcCAAGAATCGAGCAAGCTTACAGGCGTGCCTTAAACAGACAAATAACGACACAATACAACAGTGGTGTGGACAACTCCtcgatccttgtcacggatgggctattgcagcagactaccaGTGAGCACGTGAttaccaacactggacaattgaggagtggaaaaacttTGCCTGGAACAATACAGCgagttcagtttacttgagtggcctgcgcagtccccagacctcaacccaataaaGCATCTTTGGGAAGAGATGATGCCATCGCATCAGCagggaccaacatccctgtggaacgtttccgATGCCCTGAAGAATGCAGGCTggtctggaggcaaaggggggttcCGACCCACTAGTAGAtggggtgtacctaataaactgttcCGGTGAGTGTATATGGCTACCAGGGATTTTCTCTCGTGTCAAAGCAGTTTCAATAGAGTttacaaacacccacaaacagtcTATGAAAGCAAATTTGTTCAAGATTGTCTCACTCATACAAGTAAGtgataaaaaaaatacttaataTAAAGAAATTGCAAAGTGATTGGGTTTGCAGAGAGTTTGTAATGGTGTATTTTGACAAGAGAAGTTGATCTAAACCATTAAACCACAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1105250 True 1924 lncRNA 0.45 3 34153671 34156019

Neighbor

gene id symbol gene type direction distance location
LOC110535600 LOC106578631 coding downstream 290181 33859835 ~ 33863490 (-)
LOC110535599 LOC106578604 coding downstream 294048 33848052 ~ 33859623 (-)
LOC110535598 LOC106578632 coding downstream 358485 33787375 ~ 33795186 (-)
trnar-ccg NA coding downstream 418947 33734652 ~ 33734724 (-)
LOC110535597 LOC106578605 coding downstream 448887 33695897 ~ 33704784 (-)
LOC110535602 LOC106578636 coding upstream 7724 34163743 ~ 34171085 (-)
LOC110535608 LOC106578644 coding upstream 288501 34444520 ~ 34450214 (-)
LOC110535609 LOC106578643 coding upstream 335026 34491045 ~ 34499127 (-)
LOC110535610 LOC106578645 coding upstream 360436 34516455 ~ 34522431 (-)
LOC110536615 NA coding upstream 377268 34533287 ~ 34535122 (-)
G970260 NA non-coding downstream 11843 34141628 ~ 34141828 (-)
G970258 NA non-coding downstream 19756 34133629 ~ 34133915 (-)
G970257 LOC105027362 non-coding downstream 20825 34132278 ~ 34132846 (-)
G970251 NA non-coding downstream 27353 34125979 ~ 34126318 (-)
G970206 NA non-coding downstream 81951 34069398 ~ 34071720 (-)
G970233 NA non-coding upstream 177 34156196 ~ 34156534 (-)
G970267 NA non-coding upstream 5318 34161337 ~ 34161548 (-)
G970269 NA non-coding upstream 6635 34162654 ~ 34162881 (-)
G970280 NA non-coding upstream 19413 34175432 ~ 34177724 (-)
G970613 NA non-coding upstream 30894 34186913 ~ 34187426 (-)
G970066 NA other downstream 278399 33874814 ~ 33875272 (-)
G968868 NA other downstream 1486181 32666752 ~ 32667490 (-)
LOC110535581 LOC106578582 other downstream 1604085 32489195 ~ 32549643 (-)
G967535 NA other downstream 2100478 32050960 ~ 32053193 (-)
G966663 LOC100194703 other downstream 2762327 31391036 ~ 31391344 (-)
LOC110535616 LOC106578707 other upstream 654274 34810223 ~ 34978953 (-)
G971137 NA other upstream 680953 34836972 ~ 34838926 (-)
G972383 LOC106578698 other upstream 1716650 35872669 ~ 35873258 (-)
G974622 LOC106578671 other upstream 3057865 37213884 ~ 37214896 (-)
G974756 NA other upstream 3258359 37414378 ~ 37415635 (-)

Expression


Co-expression Network