G970557


Basic Information

Item Value
gene id G970557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34618995 ~ 34619259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1105601
gagagggtgtgtctgttaagtgtttggaatgcagcccttGTCTcggttgtctcaaggcttaaaaatccttctttcacctgtctgcttcccttcatctacactgattttgaagtggatttaacaggtgacatcaataagggatcatggcttttcacctggattcacctggtcagtctgtcatggaaagagcaggtgttcctaatgttccaTACATAGTGTAGGTCTAAAAAGGGGTCTAAATTGTCCACTTTCAGCATGATTATCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1105601 True 265 lncRNA 0.43 1 34618995 34619259

Neighbor

gene id symbol gene type direction distance location
acad11 acad11 coding upstream 103658 34449722 ~ 34515337 (+)
LOC110535606 LOC106578642 coding upstream 188196 34428058 ~ 34430799 (+)
LOC110535604 LOC106578639 coding upstream 191438 34183839 ~ 34427557 (+)
LOC110535603 LOC106578637 coding upstream 441265 34175502 ~ 34177730 (+)
LOC110535601 LOC106590111 coding upstream 464117 33908713 ~ 34154878 (+)
trnar-ccg-2 NA coding downstream 110337 34729596 ~ 34729668 (+)
trnar-ccg-3 NA coding downstream 111798 34731057 ~ 34731129 (+)
trnar-ccg-4 NA coding downstream 113265 34732524 ~ 34732596 (+)
trnar-ccg-5 NA coding downstream 114732 34733991 ~ 34734063 (+)
trnar-ccg-6 NA coding downstream 116217 34735476 ~ 34735548 (+)
G970552 NA non-coding upstream 5234 34613557 ~ 34613761 (+)
G970549 NA non-coding upstream 10281 34608477 ~ 34608714 (+)
G970536 NA non-coding upstream 28116 34590673 ~ 34590879 (+)
G970534 NA non-coding upstream 30186 34588533 ~ 34588809 (+)
G970497 NA non-coding upstream 84749 34532086 ~ 34534246 (+)
LOC110535611 LOC106578646 non-coding downstream 91443 34559341 ~ 34713016 (+)
G970934 NA non-coding downstream 97097 34716356 ~ 34716700 (+)
G970936 NA non-coding downstream 99677 34718936 ~ 34719194 (+)
G970942 NA non-coding downstream 106371 34725630 ~ 34725881 (+)
G970951 NA non-coding downstream 134030 34753289 ~ 34764082 (+)
G970489 LOC106578645 other upstream 96655 34516457 ~ 34522340 (+)
G970283 NA other upstream 438947 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 448008 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 823934 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1014185 33604513 ~ 33604810 (+)
G972725 NA other downstream 1630714 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2922837 37542062 ~ 37543202 (+)
G973918 NA other downstream 3031879 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3212262 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3401190 37866715 ~ 38045713 (+)

Expression


Co-expression Network