G970936


Basic Information

Item Value
gene id G970936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34718936 ~ 34719194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106009
gagcgtggcagaggtgcacccgtgaccggctcgaaaccagattgcacagcggagaaggtacggtgggatttgagatgctcagtgatctgtttgttgactaggcttttgaagaccttagataggcagggcaggatggatataggtctgtagcagtttgggtccagggtgtctccccctttgaagagggggatgactgcggcagctttccaatccttggggatctcggacgatatgaaagagaggttgaacaggctggtaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106009 True 259 lncRNA 0.53 1 34718936 34719194

Neighbor

gene id symbol gene type direction distance location
LOC110535611 LOC106578646 coding upstream 6326 34559341 ~ 34713016 (+)
acad11 acad11 coding upstream 203599 34449722 ~ 34515337 (+)
LOC110535606 LOC106578642 coding upstream 288137 34428058 ~ 34430799 (+)
LOC110535604 LOC106578639 coding upstream 291379 34183839 ~ 34427557 (+)
LOC110535603 LOC106578637 coding upstream 541206 34175502 ~ 34177730 (+)
trnar-ccg-2 NA coding downstream 10402 34729596 ~ 34729668 (+)
trnar-ccg-3 NA coding downstream 11863 34731057 ~ 34731129 (+)
trnar-ccg-4 NA coding downstream 13330 34732524 ~ 34732596 (+)
trnar-ccg-5 NA coding downstream 14797 34733991 ~ 34734063 (+)
trnar-ccg-6 NA coding downstream 16282 34735476 ~ 34735548 (+)
G970934 NA non-coding upstream 2236 34716356 ~ 34716700 (+)
G970557 NA non-coding upstream 99677 34618995 ~ 34619259 (+)
G970552 NA non-coding upstream 105175 34613557 ~ 34613761 (+)
G970549 NA non-coding upstream 110222 34608477 ~ 34608714 (+)
G970942 NA non-coding downstream 6436 34725630 ~ 34725881 (+)
G970951 NA non-coding downstream 34095 34753289 ~ 34764082 (+)
G970969 NA non-coding downstream 53963 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 126043 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 292637 35011831 ~ 35016554 (+)
G970489 LOC106578645 other upstream 196596 34516457 ~ 34522340 (+)
G970283 NA other upstream 538888 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 547949 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 923875 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1114126 33604513 ~ 33604810 (+)
G972725 NA other downstream 1530779 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2822902 37542062 ~ 37543202 (+)
G973918 NA other downstream 2931944 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3112327 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3301255 37866715 ~ 38045713 (+)

Expression


Co-expression Network