G970942


Basic Information

Item Value
gene id G970942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 34725630 ~ 34725881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106015
actcattgaagaagaactcctcATCCAATTTGaggtccagaagctctttttggtcataagagacggtagcagcaacattatgtacaaaacaagttacaaacaacgcgaaaaaacaaacaaaatagcatggttgattaagagccgataagacggcagcccTATTCTTCGGCACCATTTTCACCTCTCTTTTGGGTGTGGTCTCAGTAAGTTTGCAGAGGTCCAAACATAGTGTTCAAACATGATGAAATCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106015 True 252 lncRNA 0.40 1 34725630 34725881

Neighbor

gene id symbol gene type direction distance location
LOC110535611 LOC106578646 coding upstream 13020 34559341 ~ 34713016 (+)
acad11 acad11 coding upstream 210293 34449722 ~ 34515337 (+)
LOC110535606 LOC106578642 coding upstream 294831 34428058 ~ 34430799 (+)
LOC110535604 LOC106578639 coding upstream 298073 34183839 ~ 34427557 (+)
LOC110535603 LOC106578637 coding upstream 547900 34175502 ~ 34177730 (+)
trnar-ccg-2 NA coding downstream 3715 34729596 ~ 34729668 (+)
trnar-ccg-3 NA coding downstream 5176 34731057 ~ 34731129 (+)
trnar-ccg-4 NA coding downstream 6643 34732524 ~ 34732596 (+)
trnar-ccg-5 NA coding downstream 8110 34733991 ~ 34734063 (+)
trnar-ccg-6 NA coding downstream 9595 34735476 ~ 34735548 (+)
G970936 NA non-coding upstream 6436 34718936 ~ 34719194 (+)
G970934 NA non-coding upstream 8930 34716356 ~ 34716700 (+)
G970557 NA non-coding upstream 106371 34618995 ~ 34619259 (+)
G970552 NA non-coding upstream 111869 34613557 ~ 34613761 (+)
G970951 NA non-coding downstream 27408 34753289 ~ 34764082 (+)
G970969 NA non-coding downstream 47276 34773157 ~ 34773366 (+)
G971016 NA non-coding downstream 119356 34845237 ~ 34845761 (+)
G971261 NA non-coding downstream 285950 35011831 ~ 35016554 (+)
G971385 NA non-coding downstream 475183 35201064 ~ 35201384 (+)
G970489 LOC106578645 other upstream 203290 34516457 ~ 34522340 (+)
G970283 NA other upstream 545582 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 554643 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 930569 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1120820 33604513 ~ 33604810 (+)
G972725 NA other downstream 1524092 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2816215 37542062 ~ 37543202 (+)
G973918 NA other downstream 2925257 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 3105640 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 3294568 37866715 ~ 38045713 (+)

Expression


Co-expression Network