G971385


Basic Information

Item Value
gene id G971385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35201064 ~ 35201384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106513
ccccttcaacagtgaggtaatgggagccgctacctggccaaaaccccggataaacctccggtagtagttggcaaaaccccaAAACCActgcacctcttttaccgtggtcggagtcggccaattactcaCGGCCTTAATGCGGTCACATTCCATCACcaccccgaggtggaaatgcgataacccaggaaggagacggctcgtttggagaacacacacttctcagccttgacatataggtcatgctccagtagtctaccaagcaccttgcgcagcgtgagtggctgagta

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106513 True 288 lncRNA 0.54 2 35201064 35201384

Neighbor

gene id symbol gene type direction distance location
LOC110535615 LOC106578708 coding upstream 411318 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 433071 34767921 ~ 34767993 (+)
trnar-ccg-24 NA coding upstream 434548 34766444 ~ 34766516 (+)
trnar-ccg-23 NA coding upstream 436033 34764959 ~ 34765031 (+)
trnar-ccg-22 NA coding upstream 437504 34763488 ~ 34763560 (+)
LOC110535618 LOC106578705 coding downstream 226637 35428021 ~ 35442236 (+)
LOC110535619 NA coding downstream 313091 35514475 ~ 35521583 (+)
adcyap1 LOC100135955 coding downstream 393838 35595222 ~ 35601608 (+)
LOC110535011 NA coding downstream 518705 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 666881 35868265 ~ 35893791 (+)
G971261 NA non-coding upstream 184510 35011831 ~ 35016554 (+)
G971016 NA non-coding upstream 355303 34845237 ~ 34845761 (+)
G970969 NA non-coding upstream 427698 34773157 ~ 34773366 (+)
G970951 NA non-coding upstream 436982 34753289 ~ 34764082 (+)
G970942 NA non-coding upstream 475183 34725630 ~ 34725881 (+)
G971479 NA non-coding downstream 134735 35336119 ~ 35336343 (+)
G971482 NA non-coding downstream 137823 35339207 ~ 35339546 (+)
G971740 NA non-coding downstream 155120 35356504 ~ 35356857 (+)
G971746 NA non-coding downstream 158712 35360096 ~ 35360297 (+)
G971748 NA non-coding downstream 161006 35362390 ~ 35367654 (+)
G970489 LOC106578645 other upstream 678724 34516457 ~ 34522340 (+)
G970283 NA other upstream 1021016 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1030077 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1406003 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1596254 33604513 ~ 33604810 (+)
G972725 NA other downstream 1048589 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2340712 37542062 ~ 37543202 (+)
G973918 NA other downstream 2449754 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2630137 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2819065 37866715 ~ 38045713 (+)

Expression


Co-expression Network