G971479


Basic Information

Item Value
gene id G971479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35336119 ~ 35336343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106618
cattgatgttaatgggggtctgttcggccctccttttcctgtagtccacaatcagctcctttgtcgtgctcacattgagggagaggctgttatcctggcaccacacggccaggtctctgacctcctccctatagactgtctcatcgttgtgtcgtcagcaaacttaatgatggtgttggagtcatgcttggctaTGCAGTCGTGGTTGAATAGGGAGTCCAGGAG

Function

NR:

description
COL11A2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106618 True 225 lncRNA 0.52 1 35336119 35336343

Neighbor

gene id symbol gene type direction distance location
LOC110535615 LOC106578708 coding upstream 546373 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 568126 34767921 ~ 34767993 (+)
trnar-ccg-24 NA coding upstream 569603 34766444 ~ 34766516 (+)
trnar-ccg-23 NA coding upstream 571088 34764959 ~ 34765031 (+)
trnar-ccg-22 NA coding upstream 572559 34763488 ~ 34763560 (+)
LOC110535618 LOC106578705 coding downstream 91678 35428021 ~ 35442236 (+)
LOC110535619 NA coding downstream 178132 35514475 ~ 35521583 (+)
adcyap1 LOC100135955 coding downstream 258879 35595222 ~ 35601608 (+)
LOC110535011 NA coding downstream 383746 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 531922 35868265 ~ 35893791 (+)
G971385 NA non-coding upstream 134735 35201064 ~ 35201384 (+)
G971261 NA non-coding upstream 319565 35011831 ~ 35016554 (+)
G971016 NA non-coding upstream 490358 34845237 ~ 34845761 (+)
G970969 NA non-coding upstream 562753 34773157 ~ 34773366 (+)
G970951 NA non-coding upstream 572037 34753289 ~ 34764082 (+)
G971482 NA non-coding downstream 2864 35339207 ~ 35339546 (+)
G971740 NA non-coding downstream 20161 35356504 ~ 35356857 (+)
G971746 NA non-coding downstream 23753 35360096 ~ 35360297 (+)
G971748 NA non-coding downstream 26047 35362390 ~ 35367654 (+)
G971805 NA non-coding downstream 95577 35431920 ~ 35453705 (+)
G970489 LOC106578645 other upstream 813779 34516457 ~ 34522340 (+)
G970283 NA other upstream 1156071 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1165132 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1541058 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1731309 33604513 ~ 33604810 (+)
G972725 NA other downstream 913630 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2205753 37542062 ~ 37543202 (+)
G973918 NA other downstream 2314795 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2495178 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2684106 37866715 ~ 38045713 (+)

Expression


Co-expression Network