G971740


Basic Information

Item Value
gene id G971740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35356504 ~ 35356857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106892
cccattgagcatgtttgggatgctctggattgacgtgtacgacagcgtgttccagttcccaccaatatccagcaacttcacacagccattgaagaggagtgggacaacattccacagaccacaatcaacagcctgatcaactctatgcgagcGATGTGTCACTCTGCATGacgcaaatggtggtcacactgaccagatactgactggttttctgatccacgccactGTGACCAGCAGATACATATCTATATTTCTAATCGTGAAAAAAATCCATagtttagggcctaattcatttatcagtaaaatcttagaaattaaTGCATgctgcgtttacatttttgttcagtatagctt

Function

NR:

description
PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106892 True 354 lncRNA 0.43 1 35356504 35356857

Neighbor

gene id symbol gene type direction distance location
LOC110535615 LOC106578708 coding upstream 566758 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 588511 34767921 ~ 34767993 (+)
trnar-ccg-24 NA coding upstream 589988 34766444 ~ 34766516 (+)
trnar-ccg-23 NA coding upstream 591473 34764959 ~ 34765031 (+)
trnar-ccg-22 NA coding upstream 592944 34763488 ~ 34763560 (+)
LOC110535618 LOC106578705 coding downstream 71164 35428021 ~ 35442236 (+)
LOC110535619 NA coding downstream 157618 35514475 ~ 35521583 (+)
adcyap1 LOC100135955 coding downstream 238365 35595222 ~ 35601608 (+)
LOC110535011 NA coding downstream 363232 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 511408 35868265 ~ 35893791 (+)
G971482 NA non-coding upstream 16958 35339207 ~ 35339546 (+)
G971479 NA non-coding upstream 20161 35336119 ~ 35336343 (+)
G971385 NA non-coding upstream 155120 35201064 ~ 35201384 (+)
G971261 NA non-coding upstream 339950 35011831 ~ 35016554 (+)
G971016 NA non-coding upstream 510743 34845237 ~ 34845761 (+)
G971746 NA non-coding downstream 3239 35360096 ~ 35360297 (+)
G971748 NA non-coding downstream 5533 35362390 ~ 35367654 (+)
G971805 NA non-coding downstream 75063 35431920 ~ 35453705 (+)
G971872 NA non-coding downstream 228431 35585288 ~ 35585489 (+)
G972024 NA non-coding downstream 274343 35631200 ~ 35631579 (+)
G970489 LOC106578645 other upstream 834164 34516457 ~ 34522340 (+)
G970283 NA other upstream 1176456 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1185517 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1561443 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1751694 33604513 ~ 33604810 (+)
G972725 NA other downstream 893116 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2185239 37542062 ~ 37543202 (+)
G973918 NA other downstream 2294281 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2474664 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2663592 37866715 ~ 38045713 (+)

Expression


Co-expression Network