G971805


Basic Information

Item Value
gene id G971805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35431920 ~ 35453705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1106958
agcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctagacgtccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1106958 True 342 lncRNA 0.42 2 35431920 35453705

Neighbor

gene id symbol gene type direction distance location
LOC110535615 LOC106578708 coding upstream 642174 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 663927 34767921 ~ 34767993 (+)
trnar-ccg-24 NA coding upstream 665404 34766444 ~ 34766516 (+)
trnar-ccg-23 NA coding upstream 666889 34764959 ~ 34765031 (+)
trnar-ccg-22 NA coding upstream 668360 34763488 ~ 34763560 (+)
LOC110535619 NA coding downstream 60770 35514475 ~ 35521583 (+)
adcyap1 LOC100135955 coding downstream 141517 35595222 ~ 35601608 (+)
LOC110535011 NA coding downstream 266384 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 414560 35868265 ~ 35893791 (+)
LOC110535625 NA coding downstream 490009 35943714 ~ 35950398 (+)
G971748 NA non-coding upstream 64266 35362390 ~ 35367654 (+)
G971746 NA non-coding upstream 71623 35360096 ~ 35360297 (+)
G971740 NA non-coding upstream 75063 35356504 ~ 35356857 (+)
G971482 NA non-coding upstream 92374 35339207 ~ 35339546 (+)
G971479 NA non-coding upstream 95577 35336119 ~ 35336343 (+)
G971872 NA non-coding downstream 131583 35585288 ~ 35585489 (+)
G972024 NA non-coding downstream 177495 35631200 ~ 35631579 (+)
G972025 NA non-coding downstream 179810 35633515 ~ 35633755 (+)
G972026 NA non-coding downstream 181210 35634915 ~ 35635551 (+)
G972039 NA non-coding downstream 202705 35656410 ~ 35656619 (+)
G970489 LOC106578645 other upstream 909580 34516457 ~ 34522340 (+)
G970283 NA other upstream 1251872 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1260933 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1636859 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 1827110 33604513 ~ 33604810 (+)
G972725 NA other downstream 796268 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 2088391 37542062 ~ 37543202 (+)
G973918 NA other downstream 2197433 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2377816 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2566744 37866715 ~ 38045713 (+)

Expression


Co-expression Network