G972024


Basic Information

Item Value
gene id G972024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35631200 ~ 35631579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107203
gtgtgattttttcctgtatttattctccggactgtttagtcctgttgttttTGACTGGCAACTTAttttacgccctgtgtgttggcgtgactgtttttgttgcgctggggaataaatgtgaagaaacgactgaaccctgctctctgcgcctgattccaaccaccacacctagtagatcgtaacagaagcccgcaccttcgaaatggagtcagcaggagcagcgaccactcctctccccactatggaggagcgcgttcatcaccacacagctgtcctccatcggattggtaccgcgatggaccagatgatggagaggatggaacgatgggagaggagtggtctcccgacgtctaccccagctcccccactaccgacaccac

Function

NR:

description
PREDICTED: moesin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107203 True 380 lncRNA 0.53 1 35631200 35631579

Neighbor

gene id symbol gene type direction distance location
adcyap1 LOC100135955 coding upstream 29592 35595222 ~ 35601608 (+)
LOC110535619 NA coding upstream 109617 35514475 ~ 35521583 (+)
LOC110535618 LOC106578705 coding upstream 188964 35428021 ~ 35442236 (+)
LOC110535615 LOC106578708 coding upstream 841454 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 863207 34767921 ~ 34767993 (+)
LOC110535011 NA coding downstream 88510 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 236686 35868265 ~ 35893791 (+)
LOC110535625 NA coding downstream 312135 35943714 ~ 35950398 (+)
mlrn mlrn coding downstream 374506 36006085 ~ 36011517 (+)
LOC110535012 LOC106590147 coding downstream 381067 36012646 ~ 36019822 (+)
G971872 NA non-coding upstream 45711 35585288 ~ 35585489 (+)
G971805 NA non-coding upstream 177495 35431920 ~ 35453705 (+)
G971748 NA non-coding upstream 263546 35362390 ~ 35367654 (+)
G971746 NA non-coding upstream 270903 35360096 ~ 35360297 (+)
G971740 NA non-coding upstream 274343 35356504 ~ 35356857 (+)
G972025 NA non-coding downstream 1936 35633515 ~ 35633755 (+)
G972026 NA non-coding downstream 3336 35634915 ~ 35635551 (+)
G972039 NA non-coding downstream 24831 35656410 ~ 35656619 (+)
G972068 NA non-coding downstream 43833 35675412 ~ 35675659 (+)
G972074 NA non-coding downstream 46059 35677638 ~ 35677863 (+)
G970489 LOC106578645 other upstream 1108860 34516457 ~ 34522340 (+)
G970283 NA other upstream 1451152 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1460213 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1836139 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2026390 33604513 ~ 33604810 (+)
G972725 NA other downstream 618394 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1910517 37542062 ~ 37543202 (+)
G973918 NA other downstream 2019559 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2199942 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2388870 37866715 ~ 38045713 (+)

Expression


Co-expression Network