G972026


Basic Information

Item Value
gene id G972026
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35634915 ~ 35635551 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107205
gacagacagtggccgcaatagttagctttgttcgagctaaaaaagaacggtcggacctagagttccgaaactttagaaacctgttctagacctccgggccatggtgcgtggcgagttacgtggctctagatggttctcggaccgagaaacagcctcgtacattcgcaataacttcaattcatttttgcatcacgaaaatgacgacgtttagaaaagtctcagagacgcaaggctaggtgcgttgaaaccggctcggcccatagagacggaccccaaagtttctgtccgatagctcgttcaaggaccccgtagcaagtcatggaaaatagtggattttcagcaccaattagggtttttctcggacaccaaatgacctatcgagccgaaactcgggattcggggtcgcctcaaataggacttcacataatgtccgaactggacccgcagctagaacgtaactatgtgttttacctttttattatgttttaaactagaggcgctgtgaattatgggactgctctgacatatatgatagttggcatctaaatgagtaggaaacagtgggtttggtgtcataatgacatctaattgactgatggacactgacttgctagttgacttttgtacatttgcaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107205 True 637 lncRNA 0.45 1 35634915 35635551

Neighbor

gene id symbol gene type direction distance location
adcyap1 LOC100135955 coding upstream 33307 35595222 ~ 35601608 (+)
LOC110535619 NA coding upstream 113332 35514475 ~ 35521583 (+)
LOC110535618 LOC106578705 coding upstream 192679 35428021 ~ 35442236 (+)
LOC110535615 LOC106578708 coding upstream 845169 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 866922 34767921 ~ 34767993 (+)
LOC110535011 NA coding downstream 84538 35720089 ~ 35866083 (+)
LOC110535623 LOC106578698 coding downstream 232714 35868265 ~ 35893791 (+)
LOC110535625 NA coding downstream 308163 35943714 ~ 35950398 (+)
mlrn mlrn coding downstream 370534 36006085 ~ 36011517 (+)
LOC110535012 LOC106590147 coding downstream 377095 36012646 ~ 36019822 (+)
G972025 NA non-coding upstream 1160 35633515 ~ 35633755 (+)
G972024 NA non-coding upstream 3336 35631200 ~ 35631579 (+)
G971872 NA non-coding upstream 49426 35585288 ~ 35585489 (+)
G971805 NA non-coding upstream 181210 35431920 ~ 35453705 (+)
G971748 NA non-coding upstream 267261 35362390 ~ 35367654 (+)
G972039 NA non-coding downstream 20859 35656410 ~ 35656619 (+)
G972068 NA non-coding downstream 39861 35675412 ~ 35675659 (+)
G972074 NA non-coding downstream 42087 35677638 ~ 35677863 (+)
G972076 NA non-coding downstream 44324 35679875 ~ 35680109 (+)
G972126 NA non-coding downstream 78006 35713557 ~ 35713764 (+)
G970489 LOC106578645 other upstream 1112575 34516457 ~ 34522340 (+)
G970283 NA other upstream 1454867 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1463928 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1839854 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2030105 33604513 ~ 33604810 (+)
G972725 NA other downstream 614422 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1906545 37542062 ~ 37543202 (+)
G973918 NA other downstream 2015587 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2195970 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2384898 37866715 ~ 38045713 (+)

Expression


Co-expression Network