G972158


Basic Information

Item Value
gene id G972158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 35734309 ~ 35734539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107338
tgaaaaagaagggtcaacactgcaaatatttactcttcgcatcaacttcatgtaattgtcaataaaagcctttgacacttatgaaatgcttgtaattatacttcagtattccatagtatcatctgacaaaaatatctaaagacactgaagcagcaaatttTGTGGAAataatgtgtcattctcaacttttgacCACGACTGTATGTATCTACTTTTAACTATGTACTGAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107338 True 231 lncRNA 0.32 1 35734309 35734539

Neighbor

gene id symbol gene type direction distance location
adcyap1 LOC100135955 coding upstream 132701 35595222 ~ 35601608 (+)
LOC110535619 NA coding upstream 212726 35514475 ~ 35521583 (+)
LOC110535618 LOC106578705 coding upstream 292073 35428021 ~ 35442236 (+)
LOC110535615 LOC106578708 coding upstream 944563 34782869 ~ 34789746 (+)
trnar-ccg-25 NA coding upstream 966316 34767921 ~ 34767993 (+)
LOC110535623 LOC106578698 coding downstream 133726 35868265 ~ 35893791 (+)
LOC110535625 NA coding downstream 209175 35943714 ~ 35950398 (+)
mlrn mlrn coding downstream 271546 36006085 ~ 36011517 (+)
LOC110535012 LOC106590147 coding downstream 278107 36012646 ~ 36019822 (+)
LOC110535013 LOC105015730 coding downstream 330673 36065212 ~ 36075733 (+)
G972154 NA non-coding upstream 2175 35731921 ~ 35732134 (+)
G972137 NA non-coding upstream 14809 35719182 ~ 35719500 (+)
G972126 NA non-coding upstream 20545 35713557 ~ 35713764 (+)
G972076 NA non-coding upstream 54200 35679875 ~ 35680109 (+)
G972074 NA non-coding upstream 56446 35677638 ~ 35677863 (+)
G972192 NA non-coding downstream 27722 35762261 ~ 35762507 (+)
G972252 NA non-coding downstream 119862 35854401 ~ 35854706 (+)
G972266 NA non-coding downstream 140937 35875476 ~ 35875676 (+)
G972271 NA non-coding downstream 146544 35881083 ~ 35881349 (+)
G970489 LOC106578645 other upstream 1211969 34516457 ~ 34522340 (+)
G970283 NA other upstream 1554261 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1563322 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 1939248 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2129499 33604513 ~ 33604810 (+)
G972725 NA other downstream 515434 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1807557 37542062 ~ 37543202 (+)
G973918 NA other downstream 1916599 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 2096982 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 2285910 37866715 ~ 38045713 (+)

Expression


Co-expression Network