Gene
RNA
| Item | Value |
|---|---|
| gene id | G972460 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36032150 ~ 36032396 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: apoptosis-inducing factor 3-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1107658 | True | 247 | lncRNA | 0.39 | 1 | 36032150 | 36032396 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535012 | LOC106590147 | coding | upstream | 12328 | 36012646 ~ 36019822 (+) |
| mlrn | mlrn | coding | upstream | 20633 | 36006085 ~ 36011517 (+) |
| LOC110535625 | NA | coding | upstream | 81752 | 35943714 ~ 35950398 (+) |
| LOC110535623 | LOC106578698 | coding | upstream | 138359 | 35868265 ~ 35893791 (+) |
| LOC110535011 | NA | coding | upstream | 166067 | 35720089 ~ 35866083 (+) |
| LOC110535013 | LOC105015730 | coding | downstream | 32816 | 36065212 ~ 36075733 (+) |
| LOC110535630 | LOC106578722 | coding | downstream | 118684 | 36151080 ~ 36157644 (+) |
| LOC110535631 | LOC106578690 | coding | downstream | 132393 | 36164789 ~ 36179098 (+) |
| LOC110535014 | LOC106578720 | coding | downstream | 157028 | 36189424 ~ 36191073 (+) |
| sox17 | LOC106578689 | coding | downstream | 198719 | 36231115 ~ 36233394 (+) |
| G972458 | NA | non-coding | upstream | 1852 | 36029964 ~ 36030298 (+) |
| G972455 | LOC108238713 | non-coding | upstream | 5382 | 36026400 ~ 36026768 (+) |
| G972454 | NA | non-coding | upstream | 13596 | 36018229 ~ 36018554 (+) |
| G972427 | LOC106578695 | non-coding | upstream | 58540 | 35973031 ~ 35973610 (+) |
| G972462 | NA | non-coding | downstream | 3624 | 36036020 ~ 36036311 (+) |
| G972637 | NA | non-coding | downstream | 93682 | 36126078 ~ 36126302 (+) |
| G972644 | NA | non-coding | downstream | 98045 | 36130441 ~ 36130659 (+) |
| G972671 | NA | non-coding | downstream | 117452 | 36149848 ~ 36150047 (+) |
| G972662 | NA | non-coding | downstream | 125417 | 36157813 ~ 36158831 (+) |
| G970489 | LOC106578645 | other | upstream | 1509810 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 1852102 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 1861163 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 2237089 | 33794375 ~ 33795061 (+) |
| G969456 | LOC106578609 | other | upstream | 2427340 | 33604513 ~ 33604810 (+) |
| G972725 | NA | other | downstream | 217577 | 36249973 ~ 36250586 (+) |
| LOC110535658 | NA | other | downstream | 1509700 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 1618742 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 1799125 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 1988053 | 37866715 ~ 38045713 (+) |
