G972462


Basic Information

Item Value
gene id G972462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 36036020 ~ 36036311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107660
CTCTaacttagagactgctgccctatgtacagtaccagtcaaaagtttggacacacctactcattcaagggtttttctttatttctaccattgtctacattgtagaagaatagTGAAGGCAtgaaaactaggaaataacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaatcaaaatataatttagattcttcaaagtagccacccttttccttgatgacagctttgcacacgcttggcattctttcaaacagcttcatgaggcagtcatctggaatgcatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107660 True 292 lncRNA 0.37 1 36036020 36036311

Neighbor

gene id symbol gene type direction distance location
LOC110535012 LOC106590147 coding upstream 16198 36012646 ~ 36019822 (+)
mlrn mlrn coding upstream 24503 36006085 ~ 36011517 (+)
LOC110535625 NA coding upstream 85622 35943714 ~ 35950398 (+)
LOC110535623 LOC106578698 coding upstream 142229 35868265 ~ 35893791 (+)
LOC110535011 NA coding upstream 169937 35720089 ~ 35866083 (+)
LOC110535013 LOC105015730 coding downstream 28901 36065212 ~ 36075733 (+)
LOC110535630 LOC106578722 coding downstream 114769 36151080 ~ 36157644 (+)
LOC110535631 LOC106578690 coding downstream 128478 36164789 ~ 36179098 (+)
LOC110535014 LOC106578720 coding downstream 153113 36189424 ~ 36191073 (+)
sox17 LOC106578689 coding downstream 194804 36231115 ~ 36233394 (+)
G972460 NA non-coding upstream 3624 36032150 ~ 36032396 (+)
G972458 NA non-coding upstream 5722 36029964 ~ 36030298 (+)
G972455 LOC108238713 non-coding upstream 9252 36026400 ~ 36026768 (+)
G972454 NA non-coding upstream 17466 36018229 ~ 36018554 (+)
G972427 LOC106578695 non-coding upstream 62410 35973031 ~ 35973610 (+)
G972637 NA non-coding downstream 89767 36126078 ~ 36126302 (+)
G972644 NA non-coding downstream 94130 36130441 ~ 36130659 (+)
G972671 NA non-coding downstream 113537 36149848 ~ 36150047 (+)
G972662 NA non-coding downstream 121502 36157813 ~ 36158831 (+)
G972663 NA non-coding downstream 122687 36158998 ~ 36159369 (+)
G970489 LOC106578645 other upstream 1513680 34516457 ~ 34522340 (+)
G970283 NA other upstream 1855972 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1865033 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2240959 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2431210 33604513 ~ 33604810 (+)
G972725 NA other downstream 213662 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1505785 37542062 ~ 37543202 (+)
G973918 NA other downstream 1614827 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1795210 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 1984138 37866715 ~ 38045713 (+)

Expression


Co-expression Network