G972644


Basic Information

Item Value
gene id G972644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 36130441 ~ 36130659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107852
GTCTTGATGATCTGGTGAGGCAGCACCCCTGGTGGTAACAGCAGCATCGCTGTTAGAGAGTTTCTCTGCTGCTGAAACTATAGGGGAAGAGAAAAAAAGAAGACGGAAAAAGGAAGAGACAATCTGGGGGAAAGACAAATGCCTCAAGTTTTTGCAACGGGAAAAAGGATTGCATGTAATGGGTGTTCCTTTaccaagttttttttaaatgtattatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107852 True 219 lncRNA 0.42 1 36130441 36130659

Neighbor

gene id symbol gene type direction distance location
LOC110535013 LOC105015730 coding upstream 54708 36065212 ~ 36075733 (+)
LOC110535012 LOC106590147 coding upstream 110619 36012646 ~ 36019822 (+)
mlrn mlrn coding upstream 118924 36006085 ~ 36011517 (+)
LOC110535625 NA coding upstream 180043 35943714 ~ 35950398 (+)
LOC110535623 LOC106578698 coding upstream 236650 35868265 ~ 35893791 (+)
LOC110535630 LOC106578722 coding downstream 20421 36151080 ~ 36157644 (+)
LOC110535631 LOC106578690 coding downstream 34130 36164789 ~ 36179098 (+)
LOC110535014 LOC106578720 coding downstream 58765 36189424 ~ 36191073 (+)
sox17 LOC106578689 coding downstream 100456 36231115 ~ 36233394 (+)
LOC110535634 LOC106578686 coding downstream 124564 36255223 ~ 36266074 (+)
G972637 NA non-coding upstream 4139 36126078 ~ 36126302 (+)
G972462 NA non-coding upstream 94130 36036020 ~ 36036311 (+)
G972460 NA non-coding upstream 98045 36032150 ~ 36032396 (+)
G972458 NA non-coding upstream 100143 36029964 ~ 36030298 (+)
G972455 LOC108238713 non-coding upstream 103673 36026400 ~ 36026768 (+)
G972671 NA non-coding downstream 19189 36149848 ~ 36150047 (+)
G972662 NA non-coding downstream 27154 36157813 ~ 36158831 (+)
G972663 NA non-coding downstream 28339 36158998 ~ 36159369 (+)
G972688 NA non-coding downstream 50772 36181431 ~ 36181849 (+)
G972687 NA non-coding downstream 51416 36182075 ~ 36182289 (+)
G970489 LOC106578645 other upstream 1608101 34516457 ~ 34522340 (+)
G970283 NA other upstream 1950393 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 1959454 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2335380 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2525631 33604513 ~ 33604810 (+)
G972725 NA other downstream 119314 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1411437 37542062 ~ 37543202 (+)
G973918 NA other downstream 1520479 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1700862 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 1889790 37866715 ~ 38045713 (+)

Expression


Co-expression Network