G972688


Basic Information

Item Value
gene id G972688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 36181431 ~ 36181849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107897
tctgaggttggtaactaatgaacttatcctcttcgacagaggtaactctgggtcttcatttcctgtggcggtcctcatgaaagccagttcaATCATAGCGATTGCACTTGAAAAAtattcaaagttcttgatattttctggattgactgaccttcatgtctccgagtaatgatggactgacgtttctctttgcttatttaagctcttcttgccataatatggtcttaccaaatagggctatcttctgtatgccacccataccttgtcacaacacaactgattggctcaaacgcattaagaaggaaagacattccacaaattaactttttaacaagtcacacctgttaattgaaatgcattcctggtgactacctaatgaagctggttgagagaatgccaagagagtgcaaagctgtcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107897 True 419 lncRNA 0.40 1 36181431 36181849

Neighbor

gene id symbol gene type direction distance location
LOC110535631 LOC106578690 coding upstream 2333 36164789 ~ 36179098 (+)
LOC110535630 LOC106578722 coding upstream 23787 36151080 ~ 36157644 (+)
LOC110535013 LOC105015730 coding upstream 105698 36065212 ~ 36075733 (+)
LOC110535012 LOC106590147 coding upstream 161609 36012646 ~ 36019822 (+)
mlrn mlrn coding upstream 169914 36006085 ~ 36011517 (+)
LOC110535014 LOC106578720 coding downstream 7575 36189424 ~ 36191073 (+)
sox17 LOC106578689 coding downstream 49266 36231115 ~ 36233394 (+)
LOC110535634 LOC106578686 coding downstream 73374 36255223 ~ 36266074 (+)
LOC110535637 LOC106578684 coding downstream 162877 36344726 ~ 36461901 (+)
LOC110535639 LOC106578683 coding downstream 293653 36475502 ~ 36489512 (+)
G972663 NA non-coding upstream 22062 36158998 ~ 36159369 (+)
G972662 NA non-coding upstream 22600 36157813 ~ 36158831 (+)
G972671 NA non-coding upstream 31384 36149848 ~ 36150047 (+)
G972644 NA non-coding upstream 50772 36130441 ~ 36130659 (+)
G972637 NA non-coding upstream 55129 36126078 ~ 36126302 (+)
G972687 NA non-coding downstream 226 36182075 ~ 36182289 (+)
G972698 NA non-coding downstream 12932 36194781 ~ 36195062 (+)
G972699 NA non-coding downstream 13994 36195843 ~ 36196149 (+)
G972727 NA non-coding downstream 70731 36252580 ~ 36252784 (+)
G972749 NA non-coding downstream 108065 36289914 ~ 36351851 (+)
G970489 LOC106578645 other upstream 1659091 34516457 ~ 34522340 (+)
G970283 NA other upstream 2001383 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 2010444 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2386370 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2576621 33604513 ~ 33604810 (+)
G972725 NA other downstream 68124 36249973 ~ 36250586 (+)
LOC110535658 NA other downstream 1360247 37542062 ~ 37543202 (+)
G973918 NA other downstream 1469289 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1649672 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 1838600 37866715 ~ 38045713 (+)

Expression


Co-expression Network