G972725


Basic Information

Item Value
gene id G972725
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 36249973 ~ 36250586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107936
gatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctaaatgatccaatgttgacctaaatgactaatgatgataaattacaatccacctgtgtgtaatcaagtctccgtataactgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatacagttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatgccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaatactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgactctgtccataggacaacaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107936 True 614 TUCP 0.41 1 36249973 36250586

Neighbor

gene id symbol gene type direction distance location
sox17 LOC106578689 coding upstream 16579 36231115 ~ 36233394 (+)
LOC110535014 LOC106578720 coding upstream 58900 36189424 ~ 36191073 (+)
LOC110535631 LOC106578690 coding upstream 70875 36164789 ~ 36179098 (+)
LOC110535630 LOC106578722 coding upstream 92329 36151080 ~ 36157644 (+)
LOC110535013 LOC105015730 coding upstream 174240 36065212 ~ 36075733 (+)
LOC110535634 LOC106578686 coding downstream 4637 36255223 ~ 36266074 (+)
LOC110535637 LOC106578684 coding downstream 94140 36344726 ~ 36461901 (+)
LOC110535639 LOC106578683 coding downstream 224916 36475502 ~ 36489512 (+)
c-myc LOC106578682 coding downstream 282347 36532933 ~ 36535742 (+)
LOC110536619 NA coding downstream 294812 36545398 ~ 36584763 (+)
G972699 NA non-coding upstream 53824 36195843 ~ 36196149 (+)
G972698 NA non-coding upstream 54911 36194781 ~ 36195062 (+)
G972687 NA non-coding upstream 67684 36182075 ~ 36182289 (+)
G972688 NA non-coding upstream 68124 36181431 ~ 36181849 (+)
G972663 NA non-coding upstream 90604 36158998 ~ 36159369 (+)
G972727 NA non-coding downstream 1994 36252580 ~ 36252784 (+)
G972749 NA non-coding downstream 39328 36289914 ~ 36351851 (+)
G972741 NA non-coding downstream 40324 36290910 ~ 36291508 (+)
G972744 vps41 non-coding downstream 41801 36292387 ~ 36295696 (+)
G972742 vps41 non-coding downstream 51511 36302097 ~ 36302909 (+)
G970489 LOC106578645 other upstream 1727633 34516457 ~ 34522340 (+)
G970283 NA other upstream 2069925 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 2078986 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2454912 33794375 ~ 33795061 (+)
G969456 LOC106578609 other upstream 2645163 33604513 ~ 33604810 (+)
LOC110535658 NA other downstream 1291510 37542062 ~ 37543202 (+)
G973918 NA other downstream 1400552 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1580935 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 1769863 37866715 ~ 38045713 (+)
G974184 NA other downstream 1807212 38057798 ~ 38063100 (+)

Expression


Co-expression Network