Gene
RNA
| Item | Value |
|---|---|
| gene id | G972727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36252580 ~ 36252784 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1107938 | True | 205 | lncRNA | 0.36 | 1 | 36252580 | 36252784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sox17 | LOC106578689 | coding | upstream | 19186 | 36231115 ~ 36233394 (+) |
| LOC110535014 | LOC106578720 | coding | upstream | 61507 | 36189424 ~ 36191073 (+) |
| LOC110535631 | LOC106578690 | coding | upstream | 73482 | 36164789 ~ 36179098 (+) |
| LOC110535630 | LOC106578722 | coding | upstream | 94936 | 36151080 ~ 36157644 (+) |
| LOC110535013 | LOC105015730 | coding | upstream | 176847 | 36065212 ~ 36075733 (+) |
| LOC110535634 | LOC106578686 | coding | downstream | 2439 | 36255223 ~ 36266074 (+) |
| LOC110535637 | LOC106578684 | coding | downstream | 91942 | 36344726 ~ 36461901 (+) |
| LOC110535639 | LOC106578683 | coding | downstream | 222718 | 36475502 ~ 36489512 (+) |
| c-myc | LOC106578682 | coding | downstream | 280149 | 36532933 ~ 36535742 (+) |
| LOC110536619 | NA | coding | downstream | 292614 | 36545398 ~ 36584763 (+) |
| G972699 | NA | non-coding | upstream | 56431 | 36195843 ~ 36196149 (+) |
| G972698 | NA | non-coding | upstream | 57518 | 36194781 ~ 36195062 (+) |
| G972687 | NA | non-coding | upstream | 70291 | 36182075 ~ 36182289 (+) |
| G972688 | NA | non-coding | upstream | 70731 | 36181431 ~ 36181849 (+) |
| G972663 | NA | non-coding | upstream | 93211 | 36158998 ~ 36159369 (+) |
| G972749 | NA | non-coding | downstream | 37130 | 36289914 ~ 36351851 (+) |
| G972741 | NA | non-coding | downstream | 38126 | 36290910 ~ 36291508 (+) |
| G972744 | vps41 | non-coding | downstream | 39603 | 36292387 ~ 36295696 (+) |
| G972742 | vps41 | non-coding | downstream | 49313 | 36302097 ~ 36302909 (+) |
| G973455 | NA | non-coding | downstream | 580011 | 36832795 ~ 36833926 (+) |
| G972725 | NA | other | upstream | 1994 | 36249973 ~ 36250586 (+) |
| G970489 | LOC106578645 | other | upstream | 1730240 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 2072532 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 2081593 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 2457519 | 33794375 ~ 33795061 (+) |
| LOC110535658 | NA | other | downstream | 1289312 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 1398354 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 1578737 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 1767665 | 37866715 ~ 38045713 (+) |
| G974184 | NA | other | downstream | 1805014 | 38057798 ~ 38063100 (+) |
