G972749


Basic Information

Item Value
gene id G972749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 36289914 ~ 36351851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1107965
agattatcagtgttcttgtatgtctttcatttcctaataattgctcgcacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacgggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1107965 True 330 lncRNA 0.43 2 36289914 36351851

Neighbor

gene id symbol gene type direction distance location
LOC110535634 LOC106578686 coding upstream 23840 36255223 ~ 36266074 (+)
sox17 LOC106578689 coding upstream 56520 36231115 ~ 36233394 (+)
LOC110535014 LOC106578720 coding upstream 98841 36189424 ~ 36191073 (+)
LOC110535631 LOC106578690 coding upstream 110816 36164789 ~ 36179098 (+)
LOC110535630 LOC106578722 coding upstream 132270 36151080 ~ 36157644 (+)
LOC110535639 LOC106578683 coding downstream 123651 36475502 ~ 36489512 (+)
c-myc LOC106578682 coding downstream 181082 36532933 ~ 36535742 (+)
LOC110536619 NA coding downstream 193547 36545398 ~ 36584763 (+)
LOC118937471 NA coding downstream 355601 36707452 ~ 36707506 (+)
LOC110535645 NA coding downstream 476630 36828481 ~ 36829107 (+)
G972727 NA non-coding upstream 37130 36252580 ~ 36252784 (+)
G972699 NA non-coding upstream 93765 36195843 ~ 36196149 (+)
G972698 NA non-coding upstream 94852 36194781 ~ 36195062 (+)
G972687 NA non-coding upstream 107625 36182075 ~ 36182289 (+)
G972688 NA non-coding upstream 108065 36181431 ~ 36181849 (+)
G973455 NA non-coding downstream 480944 36832795 ~ 36833926 (+)
G973611 NA non-coding downstream 732991 37084842 ~ 37086656 (+)
G973659 NA non-coding downstream 779054 37130905 ~ 37134701 (+)
G973716 NA non-coding downstream 879834 37231685 ~ 37231898 (+)
G973721 NA non-coding downstream 884943 37236794 ~ 37237025 (+)
G972725 NA other upstream 39328 36249973 ~ 36250586 (+)
G970489 LOC106578645 other upstream 1767574 34516457 ~ 34522340 (+)
G970283 NA other upstream 2109866 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 2118927 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 2494853 33794375 ~ 33795061 (+)
LOC110535658 NA other downstream 1190245 37542062 ~ 37543202 (+)
G973918 NA other downstream 1299287 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 1479670 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 1668598 37866715 ~ 38045713 (+)
G974184 NA other downstream 1705947 38057798 ~ 38063100 (+)

Expression


Co-expression Network