Gene
RNA
| Item | Value |
|---|---|
| gene id | G972741 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36290910 ~ 36291508 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1107957 | True | 574 | lncRNA | 0.43 | 2 | 36290910 | 36291508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535634 | LOC106578686 | coding | upstream | 24836 | 36255223 ~ 36266074 (+) |
| sox17 | LOC106578689 | coding | upstream | 57516 | 36231115 ~ 36233394 (+) |
| LOC110535014 | LOC106578720 | coding | upstream | 99837 | 36189424 ~ 36191073 (+) |
| LOC110535631 | LOC106578690 | coding | upstream | 111812 | 36164789 ~ 36179098 (+) |
| LOC110535630 | LOC106578722 | coding | upstream | 133266 | 36151080 ~ 36157644 (+) |
| LOC110535637 | LOC106578684 | coding | downstream | 53218 | 36344726 ~ 36461901 (+) |
| LOC110535639 | LOC106578683 | coding | downstream | 183994 | 36475502 ~ 36489512 (+) |
| c-myc | LOC106578682 | coding | downstream | 241425 | 36532933 ~ 36535742 (+) |
| LOC110536619 | NA | coding | downstream | 253890 | 36545398 ~ 36584763 (+) |
| LOC118937471 | NA | coding | downstream | 415944 | 36707452 ~ 36707506 (+) |
| G972727 | NA | non-coding | upstream | 38126 | 36252580 ~ 36252784 (+) |
| G972699 | NA | non-coding | upstream | 94761 | 36195843 ~ 36196149 (+) |
| G972698 | NA | non-coding | upstream | 95848 | 36194781 ~ 36195062 (+) |
| G972687 | NA | non-coding | upstream | 108621 | 36182075 ~ 36182289 (+) |
| G972688 | NA | non-coding | upstream | 109061 | 36181431 ~ 36181849 (+) |
| G972744 | vps41 | non-coding | downstream | 879 | 36292387 ~ 36295696 (+) |
| G972742 | vps41 | non-coding | downstream | 10589 | 36302097 ~ 36302909 (+) |
| G973455 | NA | non-coding | downstream | 541287 | 36832795 ~ 36833926 (+) |
| G973611 | NA | non-coding | downstream | 793334 | 37084842 ~ 37086656 (+) |
| G973659 | NA | non-coding | downstream | 839397 | 37130905 ~ 37134701 (+) |
| G972725 | NA | other | upstream | 40324 | 36249973 ~ 36250586 (+) |
| G970489 | LOC106578645 | other | upstream | 1768570 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 2110862 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 2119923 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 2495849 | 33794375 ~ 33795061 (+) |
| LOC110535658 | NA | other | downstream | 1250588 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 1359630 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 1540013 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 1728941 | 37866715 ~ 38045713 (+) |
| G974184 | NA | other | downstream | 1766290 | 38057798 ~ 38063100 (+) |
