Gene
RNA
| Item | Value |
|---|---|
| gene id | G973455 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 36832795 ~ 36833926 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1108698 | True | 448 | lncRNA | 0.45 | 2 | 36832795 | 36833926 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535645 | NA | coding | upstream | 3688 | 36828481 ~ 36829107 (+) |
| LOC118937471 | NA | coding | upstream | 125289 | 36707452 ~ 36707506 (+) |
| LOC110536619 | NA | coding | upstream | 248032 | 36545398 ~ 36584763 (+) |
| c-myc | LOC106578682 | coding | upstream | 297053 | 36532933 ~ 36535742 (+) |
| LOC110535639 | LOC106578683 | coding | upstream | 343283 | 36475502 ~ 36489512 (+) |
| LOC110535646 | LOC106578679 | coding | downstream | 82255 | 36916181 ~ 36946510 (+) |
| LOC110535649 | LOC106578675 | coding | downstream | 113329 | 36947255 ~ 37051375 (+) |
| LOC110535651 | LOC106578671 | coding | downstream | 281199 | 37115125 ~ 37222524 (+) |
| LOC110535652 | LOC101448051 | coding | downstream | 391092 | 37225018 ~ 37226545 (+) |
| LOC110535653 | LOC106578669 | coding | downstream | 426716 | 37260642 ~ 37331802 (+) |
| G972749 | NA | non-coding | upstream | 480944 | 36289914 ~ 36351851 (+) |
| G972742 | vps41 | non-coding | upstream | 529886 | 36302097 ~ 36302909 (+) |
| G972744 | vps41 | non-coding | upstream | 537099 | 36292387 ~ 36295696 (+) |
| G972741 | NA | non-coding | upstream | 541287 | 36290910 ~ 36291508 (+) |
| G972727 | NA | non-coding | upstream | 580011 | 36252580 ~ 36252784 (+) |
| G973611 | NA | non-coding | downstream | 250916 | 37084842 ~ 37086656 (+) |
| G973659 | NA | non-coding | downstream | 296979 | 37130905 ~ 37134701 (+) |
| G973716 | NA | non-coding | downstream | 397759 | 37231685 ~ 37231898 (+) |
| G973721 | NA | non-coding | downstream | 402868 | 37236794 ~ 37237025 (+) |
| G973772 | NA | non-coding | downstream | 514533 | 37348459 ~ 37445700 (+) |
| G972725 | NA | other | upstream | 582209 | 36249973 ~ 36250586 (+) |
| G970489 | LOC106578645 | other | upstream | 2310455 | 34516457 ~ 34522340 (+) |
| G970283 | NA | other | upstream | 2652747 | 34179703 ~ 34180048 (+) |
| G970054 | LOC106578636 | other | upstream | 2661808 | 34163816 ~ 34170987 (+) |
| G969752 | LOC106578632 | other | upstream | 3037734 | 33794375 ~ 33795061 (+) |
| LOC110535658 | NA | other | downstream | 708170 | 37542062 ~ 37543202 (+) |
| G973918 | NA | other | downstream | 817212 | 37651138 ~ 37679368 (+) |
| lztfl1 | LOC106590188 | other | downstream | 997595 | 37813177 ~ 37835340 (+) |
| LOC110535015 | LOC106578726 | other | downstream | 1186523 | 37866715 ~ 38045713 (+) |
| G974184 | NA | other | downstream | 1223872 | 38057798 ~ 38063100 (+) |
