G973611


Basic Information

Item Value
gene id G973611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 37084842 ~ 37086656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1108871
ACCTCTGTCCACTCCGCTAGGTGAGTCCGATAAGAAACCTGTCGAACGGGCAGAAGTGTTGGGTGTGCTTCGCCTGGCAGAACCCACACATGCCTTTCCTGGACATCAAGACCATTGACGCCCTGGTTGACACCATCAATGACTACGAGGGCGGCATGGGGCTGGTCAGCCACGACTCATCCAGCAGGTACCGCCATTATGTACTCCATGACCGGGCACTTATTTGTACTTCACATCCCTTAGCCTAATGTGCAACACAATTTAAAACCCTGCCAGGTCAAtagaattggggagaaaagggacaCGTTTTCAAATGAAGTTTGTTCATTTCCTATCATTCTGATATAGAGCTGTGACACCAACtgtttGTTTCAAAAGCAATAACAGTGGGCTTGTGATTGAGCGATTAGTGCCACTAGCTGCAGTTGAAGCAGTGCATCTAGACAGAGCTGGGATAATCGTCACCCAGACTATGCTGAGCCAGTCAGCTAGGTGCAGCGTGACACTTGGGACTAAGACCACCGAGCACAGTCGTAGCTACTAGCTAGCGGTCCCGAGCCTCAGCAGAAAGGGCTGGAGGGTCACCTCAATACTTAGTCTCTCTACTGATTGTCGTCGTCTGAGACCTGGTCAGGTGGGATGGCCCGCGTGTGGCTGGCCCGAATGCTGGTGATGTGGGGACAGGAGGCGATGAGGTTGGAGATGCCCGAGGGGGTCACACCTGAGCCTTCCAGATTTACCTGGCTCAGACGCATGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1108871 True 759 lncRNA 0.53 2 37084842 37086656

Neighbor

gene id symbol gene type direction distance location
LOC110535649 LOC106578675 coding upstream 33467 36947255 ~ 37051375 (+)
LOC110535646 LOC106578679 coding upstream 138332 36916181 ~ 36946510 (+)
LOC110535645 NA coding upstream 255735 36828481 ~ 36829107 (+)
LOC118937471 NA coding upstream 377336 36707452 ~ 36707506 (+)
LOC110536619 NA coding upstream 500079 36545398 ~ 36584763 (+)
LOC110535651 LOC106578671 coding downstream 28469 37115125 ~ 37222524 (+)
LOC110535652 LOC101448051 coding downstream 138362 37225018 ~ 37226545 (+)
LOC110535653 LOC106578669 coding downstream 173986 37260642 ~ 37331802 (+)
LOC110535654 LOC106578667 coding downstream 248955 37335611 ~ 37360066 (+)
LOC110535656 LOC106578665 coding downstream 297827 37384483 ~ 37513335 (+)
G973455 NA non-coding upstream 250916 36832795 ~ 36833926 (+)
G972749 NA non-coding upstream 732991 36289914 ~ 36351851 (+)
G972742 vps41 non-coding upstream 781933 36302097 ~ 36302909 (+)
G972744 vps41 non-coding upstream 789146 36292387 ~ 36295696 (+)
G972741 NA non-coding upstream 793334 36290910 ~ 36291508 (+)
G973659 NA non-coding downstream 44249 37130905 ~ 37134701 (+)
G973716 NA non-coding downstream 145029 37231685 ~ 37231898 (+)
G973721 NA non-coding downstream 150138 37236794 ~ 37237025 (+)
G973772 NA non-coding downstream 261803 37348459 ~ 37445700 (+)
G973814 NA non-coding downstream 327576 37414232 ~ 37415622 (+)
G972725 NA other upstream 834256 36249973 ~ 36250586 (+)
G970489 LOC106578645 other upstream 2562502 34516457 ~ 34522340 (+)
G970283 NA other upstream 2904794 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 2913855 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 3289781 33794375 ~ 33795061 (+)
LOC110535658 NA other downstream 455440 37542062 ~ 37543202 (+)
G973918 NA other downstream 564482 37651138 ~ 37679368 (+)
lztfl1 LOC106590188 other downstream 744865 37813177 ~ 37835340 (+)
LOC110535015 LOC106578726 other downstream 933793 37866715 ~ 38045713 (+)
G974184 NA other downstream 971142 38057798 ~ 38063100 (+)

Expression


Co-expression Network