G973814


Basic Information

Item Value
gene id G973814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 37414232 ~ 37415622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1109096
catctaaaattttttgagcatgacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatctaaaattttttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaacaaattcgataaacaaatttgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgatgaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgatgaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcctattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1109096 True 1002 lncRNA 0.33 2 37414232 37415622

Neighbor

gene id symbol gene type direction distance location
LOC110535654 LOC106578667 coding upstream 54166 37335611 ~ 37360066 (+)
LOC110535653 LOC106578669 coding upstream 82430 37260642 ~ 37331802 (+)
LOC110535652 LOC101448051 coding upstream 187687 37225018 ~ 37226545 (+)
LOC110535651 LOC106578671 coding upstream 191708 37115125 ~ 37222524 (+)
LOC110535649 LOC106578675 coding upstream 362857 36947255 ~ 37051375 (+)
LOC110535657 LOC106578664 coding downstream 107029 37522651 ~ 37538859 (+)
LOC110535658 NA coding downstream 126440 37542062 ~ 37543202 (+)
lztfl1 LOC106590188 coding downstream 397555 37813177 ~ 37835340 (+)
LOC118937439 NA coding downstream 421364 37836986 ~ 37843507 (+)
LOC110535665 LOC106578656 coding downstream 431525 37847147 ~ 37850426 (+)
G973721 NA non-coding upstream 177207 37236794 ~ 37237025 (+)
G973716 NA non-coding upstream 182334 37231685 ~ 37231898 (+)
G973659 NA non-coding upstream 279531 37130905 ~ 37134701 (+)
G973611 NA non-coding upstream 327576 37084842 ~ 37086656 (+)
G973455 NA non-coding upstream 580306 36832795 ~ 36833926 (+)
LOC110535656 LOC106578665 non-coding downstream 93900 37384483 ~ 37513335 (+)
G973853 NA non-coding downstream 147483 37563105 ~ 37565972 (+)
G973995 NA non-coding downstream 337081 37752703 ~ 37776891 (+)
G974074 NA non-coding downstream 471338 37886960 ~ 37887426 (+)
G974090 NA non-coding downstream 492221 37907843 ~ 37908175 (+)
G972725 NA other upstream 1163646 36249973 ~ 36250586 (+)
G970489 LOC106578645 other upstream 2891892 34516457 ~ 34522340 (+)
G970283 NA other upstream 3234184 34179703 ~ 34180048 (+)
G970054 LOC106578636 other upstream 3243245 34163816 ~ 34170987 (+)
G969752 LOC106578632 other upstream 3619171 33794375 ~ 33795061 (+)
G973918 NA other downstream 235516 37651138 ~ 37679368 (+)
LOC110535015 LOC106578726 other downstream 604827 37866715 ~ 38045713 (+)
G974184 NA other downstream 642176 38057798 ~ 38063100 (+)

Expression


Co-expression Network