G973995


Basic Information

Item Value
gene id G973995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 37752703 ~ 37776891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1109285
ACATTAATGTATATAACCTAGTCCACAGGAATTTGATCAGTTAGGCATACGGGTCATGGAAAAATATTCAGATCTGGTAAAAGGCTGACATTTGGTCGTTTTAAATaggcaaaaaaataaattaaataaaagacTCTTTGGAACATGACTATAGAAATTGAAACTGTCATTTCAGCAGATGATAAACATCCATTTAGGGATATTGGATCCAAAAGCATAACTGTCATCACTGGTGGTTAGTGCAACATAGTGCAGGAAATAAattcaatgcagtattagccttatatttaACTAATGAACGCTGGGTTATTATGCATAGAtttagattacacacacacacacacaggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagacctgtaattt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1109285 True 417 lncRNA 0.34 2 37752703 37776891

Neighbor

gene id symbol gene type direction distance location
LOC110535658 NA coding upstream 209513 37542062 ~ 37543202 (+)
LOC110535657 LOC106578664 coding upstream 213844 37522651 ~ 37538859 (+)
LOC110535656 LOC106578665 coding upstream 239368 37384483 ~ 37513335 (+)
LOC110535654 LOC106578667 coding upstream 392637 37335611 ~ 37360066 (+)
LOC110535653 LOC106578669 coding upstream 420901 37260642 ~ 37331802 (+)
lztfl1 LOC106590188 coding downstream 36286 37813177 ~ 37835340 (+)
LOC118937439 NA coding downstream 60095 37836986 ~ 37843507 (+)
LOC110535665 LOC106578656 coding downstream 70256 37847147 ~ 37850426 (+)
LOC110535015 LOC106578726 coding downstream 89824 37866715 ~ 38045713 (+)
LOC110535669 impa1 coding downstream 422235 38199126 ~ 38217258 (+)
G973853 NA non-coding upstream 186731 37563105 ~ 37565972 (+)
G973772 NA non-coding upstream 307003 37348459 ~ 37445700 (+)
G973814 NA non-coding upstream 337081 37414232 ~ 37415622 (+)
G973721 NA non-coding upstream 515678 37236794 ~ 37237025 (+)
G974074 NA non-coding downstream 110069 37886960 ~ 37887426 (+)
G974090 NA non-coding downstream 130952 37907843 ~ 37908175 (+)
G974095 NA non-coding downstream 138068 37914959 ~ 38005906 (+)
G974112 NA non-coding downstream 159841 37936732 ~ 37939705 (+)
G974165 NA non-coding downstream 240710 38017601 ~ 38017823 (+)
G973918 NA other upstream 73335 37651138 ~ 37679368 (+)
G972725 NA other upstream 1502117 36249973 ~ 36250586 (+)
G970489 LOC106578645 other upstream 3230363 34516457 ~ 34522340 (+)
G970283 NA other upstream 3572655 34179703 ~ 34180048 (+)
G974184 NA other downstream 280907 38057798 ~ 38063100 (+)
G976017 NA other downstream 1280785 39057676 ~ 39058011 (+)
G978255 NA other downstream 2990945 40767836 ~ 40768229 (+)

Expression


Co-expression Network