G974240


Basic Information

Item Value
gene id G974240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 38154323 ~ 38173723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1109557
cattttagagtggccttttattttcccagcacaaggtgcacctgtgtaatgatcattctcaaaacttttggccacgactgtacttccccagagtcagatgaactcatggataccatttgtatgtttTGGTtttcagtttgaaggaagttgctaggTAGCTTTAGCGCAATGACAAAGTCTAATAGACTTCCAGTTCTTGCTCTAATGCTACTTTGCAACTTCCTTCAAACGGAACACTGAggcatacaaatggtatccacgagttcatctgactctgggaaagC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1109557 True 284 lncRNA 0.42 2 38154323 38173723

Neighbor

gene id symbol gene type direction distance location
LOC110535015 LOC106578726 coding upstream 108610 37866715 ~ 38045713 (+)
LOC110535665 LOC106578656 coding upstream 303897 37847147 ~ 37850426 (+)
LOC118937439 NA coding upstream 310816 37836986 ~ 37843507 (+)
lztfl1 LOC106590188 coding upstream 318983 37813177 ~ 37835340 (+)
LOC110535658 NA coding upstream 611133 37542062 ~ 37543202 (+)
LOC110535669 impa1 coding downstream 25403 38199126 ~ 38217258 (+)
LOC110535674 LOC106578734 coding downstream 177848 38351571 ~ 38497111 (+)
LOC110535673 enkur coding downstream 452538 38626261 ~ 38631703 (+)
LOC118937440 NA coding downstream 659439 38833162 ~ 38834976 (+)
LOC118937441 NA coding downstream 664444 38838167 ~ 38840060 (+)
G974229 NA non-coding upstream 11059 38143034 ~ 38143264 (+)
G974191 NA non-coding upstream 75960 38077812 ~ 38078363 (+)
G974187 NA non-coding upstream 80362 38073627 ~ 38073961 (+)
G974178 NA non-coding upstream 113946 38040148 ~ 38040377 (+)
G975281 NA non-coding downstream 207547 38381270 ~ 38381481 (+)
G975293 NA non-coding downstream 215681 38389404 ~ 38389783 (+)
G975318 NA non-coding downstream 233457 38407180 ~ 38407393 (+)
G975319 NA non-coding downstream 233956 38407679 ~ 38408189 (+)
G975330 NA non-coding downstream 251679 38425402 ~ 38425634 (+)
G974184 NA other upstream 91223 38057798 ~ 38063100 (+)
G973918 NA other upstream 474955 37651138 ~ 37679368 (+)
G976017 NA other downstream 883953 39057676 ~ 39058011 (+)
G978255 NA other downstream 2594113 40767836 ~ 40768229 (+)
G978396 NA other downstream 2829353 41003076 ~ 41016088 (+)
G979689 NA other downstream 3904769 42078492 ~ 42078855 (+)
G979965 NA other downstream 4354797 42528520 ~ 42533308 (+)

Expression


Co-expression Network