G975600


Basic Information

Item Value
gene id G975600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 38646319 ~ 38646749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111056
aagcaatataaataatatactcaactagaatttttttttaaatacaaataaaaatacaaataaaaaaattgctttaaagataccatactttagacaagttaaacacaccgtGCAGAAGGCTACAcaggttaaagggcaatctatagtacagggacaggGCAAACatctcaccattgttcctgtaaacagtcaagggataagggtggagaaatgcaaccactcacagagagtcatggccacagaccgaccatccactggacaaaaaaaaagtttacaatgctttaaaataaaaaataaaaaaaatattattcatgtaggcgtgaacaaaatgtaaaaataactgggaaaaacaagctcacacttcagtctctgcctgggcaagatgaacaaggcatctgcggaccacaatcaataagcacatggaTCTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111056 True 431 lncRNA 0.35 1 38646319 38646749

Neighbor

gene id symbol gene type direction distance location
LOC110535673 enkur coding upstream 14616 38626261 ~ 38631703 (+)
LOC110535674 LOC106578734 coding upstream 149208 38351571 ~ 38497111 (+)
LOC110535669 impa1 coding upstream 429061 38199126 ~ 38217258 (+)
LOC110535015 LOC106578726 coding upstream 600606 37866715 ~ 38045713 (+)
LOC110535665 LOC106578656 coding upstream 795893 37847147 ~ 37850426 (+)
LOC118937440 NA coding downstream 186413 38833162 ~ 38834976 (+)
LOC118937441 NA coding downstream 191418 38838167 ~ 38840060 (+)
LOC110535679 LOC106580199 coding downstream 304543 38951292 ~ 38954353 (+)
LOC110535680 LOC106580198 coding downstream 343105 38989854 ~ 39004586 (+)
LOC110535681 mapkapk5 coding downstream 552987 39199736 ~ 39237016 (+)
G975412 NA non-coding upstream 65809 38575726 ~ 38580510 (+)
G975372 NA non-coding upstream 98545 38502760 ~ 38547774 (+)
G975330 NA non-coding upstream 220685 38425402 ~ 38425634 (+)
G975319 NA non-coding upstream 238130 38407679 ~ 38408189 (+)
G975318 NA non-coding upstream 238926 38407180 ~ 38407393 (+)
G975605 NA non-coding downstream 38933 38685682 ~ 38726531 (+)
G975631 NA non-coding downstream 94983 38741732 ~ 38742160 (+)
G975632 NA non-coding downstream 96042 38742791 ~ 38758067 (+)
G975701 NA non-coding downstream 188483 38835232 ~ 38913447 (+)
G975723 NA non-coding downstream 229108 38875857 ~ 38877069 (+)
G974184 NA other upstream 583219 38057798 ~ 38063100 (+)
lztfl1 LOC106590188 other upstream 810984 37813177 ~ 37835340 (+)
G973918 NA other upstream 966951 37651138 ~ 37679368 (+)
LOC110535658 NA other upstream 1103117 37542062 ~ 37543202 (+)
G976017 NA other downstream 410927 39057676 ~ 39058011 (+)
G978255 NA other downstream 2121087 40767836 ~ 40768229 (+)
G978396 NA other downstream 2356327 41003076 ~ 41016088 (+)
G979689 NA other downstream 3431743 42078492 ~ 42078855 (+)
G979965 NA other downstream 3881771 42528520 ~ 42533308 (+)

Expression


Co-expression Network