G975632


Basic Information

Item Value
gene id G975632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 38742791 ~ 38758067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111150
ataccatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacatattctttatccccttacacttgtgtctataaggtagaagttttggaattgttagctagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgacttgATCTgggtagctctttcagctagctgtcaccaggagtccttggtatggtcccc

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111150 True 297 lncRNA 0.39 2 38742791 38758067

Neighbor

gene id symbol gene type direction distance location
LOC110535673 enkur coding upstream 111088 38626261 ~ 38631703 (+)
LOC110535674 LOC106578734 coding upstream 245680 38351571 ~ 38497111 (+)
LOC110535669 impa1 coding upstream 525533 38199126 ~ 38217258 (+)
LOC110535015 LOC106578726 coding upstream 697078 37866715 ~ 38045713 (+)
LOC110535665 LOC106578656 coding upstream 892365 37847147 ~ 37850426 (+)
LOC118937440 NA coding downstream 75095 38833162 ~ 38834976 (+)
LOC118937441 NA coding downstream 80100 38838167 ~ 38840060 (+)
LOC110535679 LOC106580199 coding downstream 193225 38951292 ~ 38954353 (+)
LOC110535680 LOC106580198 coding downstream 231787 38989854 ~ 39004586 (+)
LOC110535681 mapkapk5 coding downstream 441669 39199736 ~ 39237016 (+)
G975631 NA non-coding upstream 631 38741732 ~ 38742160 (+)
G975605 NA non-coding upstream 16260 38685682 ~ 38726531 (+)
G975600 NA non-coding upstream 96042 38646319 ~ 38646749 (+)
G975412 NA non-coding upstream 162281 38575726 ~ 38580510 (+)
G975372 NA non-coding upstream 195017 38502760 ~ 38547774 (+)
G975701 NA non-coding downstream 77165 38835232 ~ 38913447 (+)
G975723 NA non-coding downstream 117790 38875857 ~ 38877069 (+)
G975740 NA non-coding downstream 145129 38903196 ~ 38906766 (+)
G975747 LOC106582599 non-coding downstream 159504 38917571 ~ 38922153 (+)
G975748 NA non-coding downstream 162285 38920352 ~ 38923238 (+)
G974184 NA other upstream 679691 38057798 ~ 38063100 (+)
lztfl1 LOC106590188 other upstream 907456 37813177 ~ 37835340 (+)
G973918 NA other upstream 1063423 37651138 ~ 37679368 (+)
LOC110535658 NA other upstream 1199589 37542062 ~ 37543202 (+)
G976017 NA other downstream 299609 39057676 ~ 39058011 (+)
G978255 NA other downstream 2009769 40767836 ~ 40768229 (+)
G978396 NA other downstream 2245009 41003076 ~ 41016088 (+)
G979689 NA other downstream 3320425 42078492 ~ 42078855 (+)
G979965 NA other downstream 3770453 42528520 ~ 42533308 (+)

Expression


Co-expression Network