G975748


Basic Information

Item Value
gene id G975748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 38920352 ~ 38923238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111276
gtactgttcatcgggagcttcaagaaatggggttccatggccgagcagctgcacacaagcctaagatcaccatgcgcaatgttaAGTgttagctggagtggtgtaaagctcgccgccattggacacgCGTTCTTTAAAGTGATGAATGATGCATCTGACAGtccaacggactaatctgggtttggcggatgccagcagaacgatacctgccccaatgcatagtggcaactgtaaagtttggcggaggaggaataatggtcaggggctgtttttcatggtttcccttcactggaactaaggggccagtgaagggaaaccatgaaaaacagcccccgatcattatttctcctccgccaaacttaacgctacagcatgcaatggcattctagatgattctgtgcttccaactttgtggcagtttgaggaaggcctttcctgtttcagcaggacaatgccgccgtgcacaaagcaaggtccatacagaaatggtttgtcgagatctgtgtggaagaacttgaatggcctgcacagagccctgacctcaaccccatcaaacacctttgggatgaattggaacgccgactgtcagccaggcctaatcgcccaacatcagtgccagacctcactaatgcttttgtggctgaatggaagcaagaccccaatgcaatgttccaacatctggtggaaaggcttcccagaagagtggaggctgttatagcagcaaaggggggacgaactccatattaatgcccatgattttgagaTGTTCGACGTGCAGGTCCAAAAGGAATTGTTTATTATTACATTAAGTCATGTCTTTTACCTAATGTCGGCCATCCAAACATGCACAAATTCCCATAGAAACACAGCCATTTTAAAAGTGCACAGCTTGTGCAATGTACCATGCCTTTCATTTTGTGTCTTACAGGAATAGTGGCAACCAGTCATTCAGCACCGATACCTGTTTTGAGACCCACATTTTTATct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111276 True 987 lncRNA 0.47 2 38920352 38923238

Neighbor

gene id symbol gene type direction distance location
LOC118937441 NA coding upstream 80292 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 85376 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 288649 38626261 ~ 38631703 (+)
LOC110535674 LOC106578734 coding upstream 423241 38351571 ~ 38497111 (+)
LOC110535669 impa1 coding upstream 703094 38199126 ~ 38217258 (+)
LOC110535679 LOC106580199 coding downstream 28054 38951292 ~ 38954353 (+)
LOC110535680 LOC106580198 coding downstream 66616 38989854 ~ 39004586 (+)
LOC110535681 mapkapk5 coding downstream 276498 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 559257 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 703731 39626969 ~ 39633152 (+)
G975701 NA non-coding upstream 6905 38835232 ~ 38913447 (+)
G975740 NA non-coding upstream 13586 38903196 ~ 38906766 (+)
G975723 NA non-coding upstream 43283 38875857 ~ 38877069 (+)
G975632 NA non-coding upstream 162285 38742791 ~ 38758067 (+)
G975631 NA non-coding upstream 178192 38741732 ~ 38742160 (+)
G976016 NA non-coding downstream 133814 39057052 ~ 39057433 (+)
G976024 NA non-coding downstream 138733 39061971 ~ 39062338 (+)
G976054 NA non-coding downstream 163688 39086926 ~ 39087255 (+)
G976055 NA non-coding downstream 164220 39087458 ~ 39087739 (+)
G976074 NA non-coding downstream 182924 39106162 ~ 39106409 (+)
G974184 NA other upstream 857252 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 877022 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1085017 37813177 ~ 37835340 (+)
G973918 NA other upstream 1240984 37651138 ~ 37679368 (+)
LOC110535658 NA other upstream 1377150 37542062 ~ 37543202 (+)
G976017 NA other downstream 134438 39057676 ~ 39058011 (+)
G978255 NA other downstream 1844598 40767836 ~ 40768229 (+)
G978396 NA other downstream 2079838 41003076 ~ 41016088 (+)
G979689 NA other downstream 3155254 42078492 ~ 42078855 (+)
G979965 NA other downstream 3605282 42528520 ~ 42533308 (+)

Expression


Co-expression Network