G976024


Basic Information

Item Value
gene id G976024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39061971 ~ 39062338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111567
CACGAATGCAACCACCACCATTGCactatagttttcacgtctaatagatgtgaagagggggatttgttatataaatattcatacacatagctcatataaacaaagacattccttcgtaagaacacatacacccagccataagactgaccccctcttccttgtataaacacacatctcatctccctctactggccggtcccaagagcaaaggacttttgctgtgcaccaatggggcccgctctggctagagcaaggcccgcctccaaccctccgaccagtcaagaagaccgaaacgacaagactccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111567 True 307 lncRNA 0.48 2 39061971 39062338

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 57385 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 107618 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 221911 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 226995 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 430268 38626261 ~ 38631703 (+)
LOC110535681 mapkapk5 coding downstream 137398 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 420157 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 564631 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 593293 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 595272 39657610 ~ 39660250 (+)
G976016 NA non-coding upstream 4538 39057052 ~ 39057433 (+)
G975748 NA non-coding upstream 138733 38920352 ~ 38923238 (+)
G975747 LOC106582599 non-coding upstream 139818 38917571 ~ 38922153 (+)
G975701 NA non-coding upstream 148524 38835232 ~ 38913447 (+)
G976054 NA non-coding downstream 24588 39086926 ~ 39087255 (+)
G976055 NA non-coding downstream 25120 39087458 ~ 39087739 (+)
G976074 NA non-coding downstream 43824 39106162 ~ 39106409 (+)
G976078 NA non-coding downstream 48078 39110416 ~ 39110617 (+)
G976085 NA non-coding downstream 57618 39119956 ~ 39120180 (+)
G976017 NA other upstream 3960 39057676 ~ 39058011 (+)
G974184 NA other upstream 998871 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1018641 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1226636 37813177 ~ 37835340 (+)
G973918 NA other upstream 1382603 37651138 ~ 37679368 (+)
G978255 NA other downstream 1705498 40767836 ~ 40768229 (+)
G978396 NA other downstream 1940738 41003076 ~ 41016088 (+)
G979689 NA other downstream 3016154 42078492 ~ 42078855 (+)
G979965 NA other downstream 3466182 42528520 ~ 42533308 (+)
G980019 NA other downstream 3569486 42631824 ~ 42636709 (+)

Expression


Co-expression Network