G976054


Basic Information

Item Value
gene id G976054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39086926 ~ 39087255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111600
ttctcaaacatttctaaaaacctgtttttgctttgtcattatggggtattgtgtatagattgatgaggggaaaaaacaatttaaccaattttagaataaggttgtaacctaAAACAATTGGGGAAAAGTCAACTGGTCTGAATACTGTTCGAAGACACTGTTTGCATCAAATACCCGACTCCTTGAAAGTCGTGTATTGATTATATATAGCATGCGTGATGAATGGTGATCACTGAAATCAACAGATGCAGTGTTGCTCATTGGATTACCCCATATCATGGAATAGGCTATGTGAAAGTTTTAAAGACAAAAGAGAGATtggaattatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111600 True 330 lncRNA 0.35 1 39086926 39087255

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 82340 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 132573 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 246866 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 251950 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 455223 38626261 ~ 38631703 (+)
LOC110535681 mapkapk5 coding downstream 112481 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 395240 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 539714 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 568376 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 570355 39657610 ~ 39660250 (+)
G976024 NA non-coding upstream 24588 39061971 ~ 39062338 (+)
G976016 NA non-coding upstream 29493 39057052 ~ 39057433 (+)
G975748 NA non-coding upstream 163688 38920352 ~ 38923238 (+)
G975747 LOC106582599 non-coding upstream 164773 38917571 ~ 38922153 (+)
G975740 NA non-coding upstream 180160 38903196 ~ 38906766 (+)
G976055 NA non-coding downstream 203 39087458 ~ 39087739 (+)
G976074 NA non-coding downstream 18907 39106162 ~ 39106409 (+)
G976078 NA non-coding downstream 23161 39110416 ~ 39110617 (+)
G976085 NA non-coding downstream 32701 39119956 ~ 39120180 (+)
G976090 NA non-coding downstream 39420 39126675 ~ 39126997 (+)
G976017 NA other upstream 28915 39057676 ~ 39058011 (+)
G974184 NA other upstream 1023826 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1043596 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1251591 37813177 ~ 37835340 (+)
G973918 NA other upstream 1407558 37651138 ~ 37679368 (+)
G978255 NA other downstream 1680581 40767836 ~ 40768229 (+)
G978396 NA other downstream 1915821 41003076 ~ 41016088 (+)
G979689 NA other downstream 2991237 42078492 ~ 42078855 (+)
G979965 NA other downstream 3441265 42528520 ~ 42533308 (+)
G980019 NA other downstream 3544569 42631824 ~ 42636709 (+)

Expression


Co-expression Network