G976078


Basic Information

Item Value
gene id G976078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39110416 ~ 39110617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111624
GAATATACAGTTgacgtcggaagtttatatacaccttagccaaatacatttaaactcagtttttcgcaattcctaacatttaatcatagcaaaaattccctgtcataggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatagaagagagtgatttatttcagcttttatttatttcatcacatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111624 True 202 lncRNA 0.30 1 39110416 39110617

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 105830 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 156063 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 270356 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 275440 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 478713 38626261 ~ 38631703 (+)
LOC110535681 mapkapk5 coding downstream 89119 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 371878 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 516352 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 545014 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 546993 39657610 ~ 39660250 (+)
G976074 NA non-coding upstream 4007 39106162 ~ 39106409 (+)
G976055 NA non-coding upstream 22677 39087458 ~ 39087739 (+)
G976054 NA non-coding upstream 23161 39086926 ~ 39087255 (+)
G976024 NA non-coding upstream 48078 39061971 ~ 39062338 (+)
G976016 NA non-coding upstream 52983 39057052 ~ 39057433 (+)
G976085 NA non-coding downstream 9339 39119956 ~ 39120180 (+)
G976090 NA non-coding downstream 16058 39126675 ~ 39126997 (+)
G976100 NA non-coding downstream 33936 39144553 ~ 39144853 (+)
G976101 NA non-coding downstream 34610 39145227 ~ 39145697 (+)
G976060 smad4 non-coding downstream 43547 39154164 ~ 39155730 (+)
G976017 NA other upstream 52405 39057676 ~ 39058011 (+)
G974184 NA other upstream 1047316 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1067086 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1275081 37813177 ~ 37835340 (+)
G973918 NA other upstream 1431048 37651138 ~ 37679368 (+)
G978255 NA other downstream 1657219 40767836 ~ 40768229 (+)
G978396 NA other downstream 1892459 41003076 ~ 41016088 (+)
G979689 NA other downstream 2967875 42078492 ~ 42078855 (+)
G979965 NA other downstream 3417903 42528520 ~ 42533308 (+)
G980019 NA other downstream 3521207 42631824 ~ 42636709 (+)

Expression


Co-expression Network