G976090


Basic Information

Item Value
gene id G976090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39126675 ~ 39126997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111636
ataaaatgatataaaaatcaaactgtcattaaatcacacatgtaagatataTATAATTagagctacactcgttgtgaatccagcgaACATGTCAGAttaattttaaaaaggcttttcggtgaaagcataagaagctattatctgatgatagcacaacagtaaacaaagagagtagcatatttcaaccctgcaggcgctacacaaaacgcagaaataaaatataaatcatgccttacctttgacgagcttcttttgttggcactccaatatgtcccataaacatcacaattggtccttttgttcgattaattccgtccatatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111636 True 323 lncRNA 0.34 1 39126675 39126997

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 122089 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 172322 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 286615 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 291699 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 494972 38626261 ~ 38631703 (+)
LOC110535681 mapkapk5 coding downstream 72739 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 355498 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 499972 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 528634 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 530613 39657610 ~ 39660250 (+)
G976085 NA non-coding upstream 6495 39119956 ~ 39120180 (+)
G976078 NA non-coding upstream 16058 39110416 ~ 39110617 (+)
G976074 NA non-coding upstream 20266 39106162 ~ 39106409 (+)
G976055 NA non-coding upstream 38936 39087458 ~ 39087739 (+)
G976054 NA non-coding upstream 39420 39086926 ~ 39087255 (+)
G976100 NA non-coding downstream 17556 39144553 ~ 39144853 (+)
G976101 NA non-coding downstream 18230 39145227 ~ 39145697 (+)
G976060 smad4 non-coding downstream 27167 39154164 ~ 39155730 (+)
G976106 NA non-coding downstream 45281 39172278 ~ 39172510 (+)
G976066 NA non-coding downstream 96949 39223946 ~ 39224300 (+)
G976017 NA other upstream 68664 39057676 ~ 39058011 (+)
G974184 NA other upstream 1063575 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1083345 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1291340 37813177 ~ 37835340 (+)
G973918 NA other upstream 1447307 37651138 ~ 37679368 (+)
G978255 NA other downstream 1640839 40767836 ~ 40768229 (+)
G978396 NA other downstream 1876079 41003076 ~ 41016088 (+)
G979689 NA other downstream 2951495 42078492 ~ 42078855 (+)
G979965 NA other downstream 3401523 42528520 ~ 42533308 (+)
G980019 NA other downstream 3504827 42631824 ~ 42636709 (+)

Expression


Co-expression Network