G976101


Basic Information

Item Value
gene id G976101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39145227 ~ 39145697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111647
gtagatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaattaaactgtccacttaggaagcaacaccgattgacaataaatgtcacatgctgttgtgcaaatggaatagacaacaggtggaaattataggcaattagaaagacacccccaataaaggagtggttctgcaggtggggaccacagaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggcggtgctttcactctagtggtagcatgagacggagtctacaatccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgtccagagcatggaggtgctaccaggagacaggtcagtacatcaggagatgtggagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111647 True 471 lncRNA 0.46 1 39145227 39145697

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 140641 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 190874 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 305167 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 310251 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 513524 38626261 ~ 38631703 (+)
LOC110535681 mapkapk5 coding downstream 54039 39199736 ~ 39237016 (+)
LOC110535687 LOC106580186 coding downstream 336798 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 481272 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 509934 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 511913 39657610 ~ 39660250 (+)
G976100 NA non-coding upstream 374 39144553 ~ 39144853 (+)
G976090 NA non-coding upstream 18230 39126675 ~ 39126997 (+)
G976085 NA non-coding upstream 25047 39119956 ~ 39120180 (+)
G976078 NA non-coding upstream 34610 39110416 ~ 39110617 (+)
G976074 NA non-coding upstream 38818 39106162 ~ 39106409 (+)
G976060 smad4 non-coding downstream 8467 39154164 ~ 39155730 (+)
G976106 NA non-coding downstream 26581 39172278 ~ 39172510 (+)
G976066 NA non-coding downstream 78249 39223946 ~ 39224300 (+)
G976064 NA non-coding downstream 79559 39225256 ~ 39225849 (+)
G976062 NA non-coding downstream 81567 39227264 ~ 39227840 (+)
G976017 NA other upstream 87216 39057676 ~ 39058011 (+)
G974184 NA other upstream 1082127 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1101897 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1309892 37813177 ~ 37835340 (+)
G973918 NA other upstream 1465859 37651138 ~ 37679368 (+)
G978255 NA other downstream 1622139 40767836 ~ 40768229 (+)
G978396 NA other downstream 1857379 41003076 ~ 41016088 (+)
G979689 NA other downstream 2932795 42078492 ~ 42078855 (+)
G979965 NA other downstream 3382823 42528520 ~ 42533308 (+)
G980019 NA other downstream 3486127 42631824 ~ 42636709 (+)

Expression


Co-expression Network