G976066


Basic Information

Item Value
gene id G976066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39223946 ~ 39224300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111612
ccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtggcagtctgatggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaatcaaaattgaactttttggcaacaatgcaaaacgttatgtttgacgtaaaagcaacacagctcatcaccctgaacaca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111612 True 355 lncRNA 0.43 1 39223946 39224300

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 219360 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 269593 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 383886 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 388970 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 592243 38626261 ~ 38631703 (+)
LOC110535687 LOC106580186 coding downstream 258195 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 402669 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 431331 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 433310 39657610 ~ 39660250 (+)
LOC110535018 LOC106580184 coding downstream 470610 39694910 ~ 39787287 (+)
G976106 NA non-coding upstream 51436 39172278 ~ 39172510 (+)
G976060 smad4 non-coding upstream 68216 39154164 ~ 39155730 (+)
G976101 NA non-coding upstream 78249 39145227 ~ 39145697 (+)
G976100 NA non-coding upstream 79093 39144553 ~ 39144853 (+)
G976090 NA non-coding upstream 96949 39126675 ~ 39126997 (+)
G976064 NA non-coding downstream 956 39225256 ~ 39225849 (+)
G976062 NA non-coding downstream 2964 39227264 ~ 39227840 (+)
G976065 NA non-coding downstream 5375 39229675 ~ 39231437 (+)
G976383 NA non-coding downstream 385132 39609432 ~ 39609765 (+)
G976396 NA non-coding downstream 410068 39634368 ~ 39634602 (+)
G976017 NA other upstream 165935 39057676 ~ 39058011 (+)
G974184 NA other upstream 1160846 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1180616 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1388611 37813177 ~ 37835340 (+)
G973918 NA other upstream 1544578 37651138 ~ 37679368 (+)
G978255 NA other downstream 1543536 40767836 ~ 40768229 (+)
G978396 NA other downstream 1778776 41003076 ~ 41016088 (+)
G979689 NA other downstream 2854192 42078492 ~ 42078855 (+)
G979965 NA other downstream 3304220 42528520 ~ 42533308 (+)
G980019 NA other downstream 3407524 42631824 ~ 42636709 (+)

Expression


Co-expression Network