G976062


Basic Information

Item Value
gene id G976062
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39227264 ~ 39227840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111608
agtactattgtttgtacagatgaacgttgtacctgaaggcgtttggaaattgcccccaaggatgaaccagacttgtggaggtctacaattatttttttgtcttggctgatttatttaggtTTTCCCattaatgtcaagcaaagaggcactgagtttgaaggtaggccttaaaatacatccacaagtacacctccaattgactcaaatgatgtaaattagcctatcagaagcttctaaagtcatgacatccttttctgtaattttccaagctgtttaaaggcacaatcaactttgtgtatgtaaacttctgacccactggaattgtgatacagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtcatgcacaaagtagatgtcgtaaccgaattgccaaaactatagtttaacaagaaatttgtggagtggtttaaaaatgagttttaatgactccaacctgagtgtacgtaaacttccgacttcaactgtacatttgaaCCTTCCTATGGACTTAAGTCTTAGCCTTATTTGCGCATTTTGCCCCTTGCAGGAACTTACACTGAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111608 True 577 lncRNA 0.37 1 39227264 39227840

Neighbor

gene id symbol gene type direction distance location
LOC110535680 LOC106580198 coding upstream 222678 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 272911 38951292 ~ 38954353 (+)
LOC118937441 NA coding upstream 387204 38838167 ~ 38840060 (+)
LOC118937440 NA coding upstream 392288 38833162 ~ 38834976 (+)
LOC110535673 enkur coding upstream 595561 38626261 ~ 38631703 (+)
LOC110535687 LOC106580186 coding downstream 254655 39482495 ~ 39520766 (+)
LOC110535016 NA coding downstream 399129 39626969 ~ 39633152 (+)
LOC118937442 NA coding downstream 427791 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 429770 39657610 ~ 39660250 (+)
LOC110535018 LOC106580184 coding downstream 467070 39694910 ~ 39787287 (+)
G976064 NA non-coding upstream 1415 39225256 ~ 39225849 (+)
G976066 NA non-coding upstream 2964 39223946 ~ 39224300 (+)
G976106 NA non-coding upstream 54754 39172278 ~ 39172510 (+)
G976060 smad4 non-coding upstream 71534 39154164 ~ 39155730 (+)
G976101 NA non-coding upstream 81567 39145227 ~ 39145697 (+)
G976065 NA non-coding downstream 1835 39229675 ~ 39231437 (+)
G976383 NA non-coding downstream 381592 39609432 ~ 39609765 (+)
G976396 NA non-coding downstream 406528 39634368 ~ 39634602 (+)
G976714 NA non-coding downstream 439230 39667070 ~ 39667337 (+)
G976719 NA non-coding downstream 443589 39671429 ~ 39671635 (+)
G976017 NA other upstream 169253 39057676 ~ 39058011 (+)
G974184 NA other upstream 1164164 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1183934 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1391929 37813177 ~ 37835340 (+)
G973918 NA other upstream 1547896 37651138 ~ 37679368 (+)
G978255 NA other downstream 1539996 40767836 ~ 40768229 (+)
G978396 NA other downstream 1775236 41003076 ~ 41016088 (+)
G979689 NA other downstream 2850652 42078492 ~ 42078855 (+)
G979965 NA other downstream 3300680 42528520 ~ 42533308 (+)
G980019 NA other downstream 3403984 42631824 ~ 42636709 (+)

Expression


Co-expression Network