G976396


Basic Information

Item Value
gene id G976396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39634368 ~ 39634602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1111971
tcattagagttaccagcctcagaaatcgacaattaactgcacctcagactgcagcctaaaaaatgcttcagagttcaaataacagacacatcaacagttcagaggagactacgtgaatcaggccttcatggtcgaattgctgcaaaaaaatatttacaaataaaggacaccaataatcagaagagacttgcttgggccaagatacAAGAGCAATggtcattagactggtggaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1111971 True 235 lncRNA 0.40 1 39634368 39634602

Neighbor

gene id symbol gene type direction distance location
LOC110535016 NA coding upstream 1216 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 113602 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 397352 39199736 ~ 39237016 (+)
LOC110535680 LOC106580198 coding upstream 629782 38989854 ~ 39004586 (+)
LOC110535679 LOC106580199 coding upstream 680015 38951292 ~ 38954353 (+)
LOC118937442 NA coding downstream 21029 39655631 ~ 39656997 (+)
LOC118937443 NA coding downstream 23008 39657610 ~ 39660250 (+)
LOC110535018 LOC106580184 coding downstream 60308 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 201604 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 306988 39941590 ~ 39949172 (+)
G976383 NA non-coding upstream 24603 39609432 ~ 39609765 (+)
G976065 NA non-coding upstream 402931 39229675 ~ 39231437 (+)
G976062 NA non-coding upstream 406528 39227264 ~ 39227840 (+)
G976064 NA non-coding upstream 408519 39225256 ~ 39225849 (+)
G976066 NA non-coding upstream 410068 39223946 ~ 39224300 (+)
G976714 NA non-coding downstream 32468 39667070 ~ 39667337 (+)
G976719 NA non-coding downstream 36827 39671429 ~ 39671635 (+)
G976722 NA non-coding downstream 39760 39674362 ~ 39674629 (+)
G976733 NA non-coding downstream 58261 39692863 ~ 39693126 (+)
G976911 NA non-coding downstream 165078 39799680 ~ 39799892 (+)
G976017 NA other upstream 576357 39057676 ~ 39058011 (+)
G974184 NA other upstream 1571268 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1591038 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1799033 37813177 ~ 37835340 (+)
G973918 NA other upstream 1955000 37651138 ~ 37679368 (+)
G978255 NA other downstream 1133234 40767836 ~ 40768229 (+)
G978396 NA other downstream 1368474 41003076 ~ 41016088 (+)
G979689 NA other downstream 2443890 42078492 ~ 42078855 (+)
G979965 NA other downstream 2893918 42528520 ~ 42533308 (+)
G980019 NA other downstream 2997222 42631824 ~ 42636709 (+)

Expression


Co-expression Network