G976714


Basic Information

Item Value
gene id G976714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39667070 ~ 39667337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112317
agcgactcctgtgtaggtgcagtgcacgctgaacaggtcgccaggtgtacagtgtttcccccgacacattggtgcggctggcttccaggttggatgtgcattgtgtcaagaagcagtgtggcttggttttgttgtgtttcggaggacgcatggctcttgaccttcgcctctcccgagtccgtattggatttgcagcgatgagacaagactgtaactactatcaattgggaagaaaaaaggggtaaaaaaacaaAGGGTTGTACTTGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112317 True 268 lncRNA 0.50 1 39667070 39667337

Neighbor

gene id symbol gene type direction distance location
LOC118937443 NA coding upstream 6820 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 10073 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 33918 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 146304 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 430054 39199736 ~ 39237016 (+)
LOC110535018 LOC106580184 coding downstream 27573 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 168869 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 274253 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 313371 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 317248 39984585 ~ 39990217 (+)
G976396 NA non-coding upstream 32468 39634368 ~ 39634602 (+)
G976383 NA non-coding upstream 57305 39609432 ~ 39609765 (+)
G976065 NA non-coding upstream 435633 39229675 ~ 39231437 (+)
G976062 NA non-coding upstream 439230 39227264 ~ 39227840 (+)
G976064 NA non-coding upstream 441221 39225256 ~ 39225849 (+)
G976719 NA non-coding downstream 4092 39671429 ~ 39671635 (+)
G976722 NA non-coding downstream 7025 39674362 ~ 39674629 (+)
G976733 NA non-coding downstream 25526 39692863 ~ 39693126 (+)
G976911 NA non-coding downstream 132343 39799680 ~ 39799892 (+)
G976922 NA non-coding downstream 140461 39807798 ~ 39808057 (+)
G976017 NA other upstream 609059 39057676 ~ 39058011 (+)
G974184 NA other upstream 1603970 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1623740 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1831735 37813177 ~ 37835340 (+)
G973918 NA other upstream 1987702 37651138 ~ 37679368 (+)
G978255 NA other downstream 1100499 40767836 ~ 40768229 (+)
G978396 NA other downstream 1335739 41003076 ~ 41016088 (+)
G979689 NA other downstream 2411155 42078492 ~ 42078855 (+)
G979965 NA other downstream 2861183 42528520 ~ 42533308 (+)
G980019 NA other downstream 2964487 42631824 ~ 42636709 (+)

Expression


Co-expression Network