G976719


Basic Information

Item Value
gene id G976719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39671429 ~ 39671635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112322
CACTCACATACTGACAAAGCCTAAACTTGATGCCTGTGAGGAGAGGTGGGTGGTGAAGCTAGCCCCGTATGACTTTGATCTgaaatacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgaaaTTTTTCCATTTTCCAAACGTACTATCAAACCAATTAGTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112322 True 207 lncRNA 0.42 1 39671429 39671635

Neighbor

gene id symbol gene type direction distance location
LOC118937443 NA coding upstream 11179 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 14432 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 38277 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 150663 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 434413 39199736 ~ 39237016 (+)
LOC110535018 LOC106580184 coding downstream 23275 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 164571 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 269955 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 309073 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 312950 39984585 ~ 39990217 (+)
G976714 NA non-coding upstream 4092 39667070 ~ 39667337 (+)
G976396 NA non-coding upstream 36827 39634368 ~ 39634602 (+)
G976383 NA non-coding upstream 61664 39609432 ~ 39609765 (+)
G976065 NA non-coding upstream 439992 39229675 ~ 39231437 (+)
G976062 NA non-coding upstream 443589 39227264 ~ 39227840 (+)
G976722 NA non-coding downstream 2727 39674362 ~ 39674629 (+)
G976733 NA non-coding downstream 21228 39692863 ~ 39693126 (+)
G976911 NA non-coding downstream 128045 39799680 ~ 39799892 (+)
G976922 NA non-coding downstream 136163 39807798 ~ 39808057 (+)
G976925 NA non-coding downstream 137274 39808909 ~ 39809141 (+)
G976017 NA other upstream 613418 39057676 ~ 39058011 (+)
G974184 NA other upstream 1608329 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1628099 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1836094 37813177 ~ 37835340 (+)
G973918 NA other upstream 1992061 37651138 ~ 37679368 (+)
G978255 NA other downstream 1096201 40767836 ~ 40768229 (+)
G978396 NA other downstream 1331441 41003076 ~ 41016088 (+)
G979689 NA other downstream 2406857 42078492 ~ 42078855 (+)
G979965 NA other downstream 2856885 42528520 ~ 42533308 (+)
G980019 NA other downstream 2960189 42631824 ~ 42636709 (+)

Expression


Co-expression Network